RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 OR13C4Q8NGS5 318 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 EPS8L3Q8TE67 593 aaKnown RBP19.94■□□□□ 0.78
ATG4D-208ENST00000588667 SETD7Q8WTS6 366 aaKnown RBP19.94■□□□□ 0.78
ATG4D-208ENST00000588667 GLYATL1Q969I3 302 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 ARL8AQ96BM9 186 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 PGM2Q96G03 612 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 ATP6V1G3Q96LB4 118 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 RANBP9Q96S59 729 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 IL22Q9GZX6 179 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 SLC32A1Q9H598 525 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 MRPL40Q9NQ50 206 aaKnown RBP19.94■□□□□ 0.78
ATG4D-208ENST00000588667 UCKL1Q9NWZ5 548 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 VPS18Q9P253 973 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 APPL1Q9UKG1 709 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 PCOLCE2Q9UKZ9 415 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 CSNK1G3Q9Y6M4 447 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 BPTFQ12830 3046 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 HEATR9A2RTY3 570 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 NEMP2A6NFY4 417 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 MROH6A6NGR9 719 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 GAPDHSO14556 408 aaPredicted RBP19.94■□□□□ 0.78
ATG4D-208ENST00000588667 AQP9O43315 295 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 TNFP01375 233 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 PGAM1P18669 254 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 ID4P47928 161 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 ITGA9Q13797 1035 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 LONRF1Q17RB8 773 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 ATP13A5Q4VNC0 1218 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 PRRT3Q5FWE3 981 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 AGBL2Q5U5Z8 902 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 DOK6Q6PKX4 331 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 FSTL5Q8N475 847 aaPredicted RBP19.94■□□□□ 0.78
ATG4D-208ENST00000588667 STYXQ8WUJ0 223 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 DNAJC1Q96KC8 554 aaKnown RBP19.94■□□□□ 0.78
ATG4D-208ENST00000588667 STMN4Q9H169 189 aaPredicted RBP19.94■□□□□ 0.78
ATG4D-208ENST00000588667 ACSS3Q9H6R3 686 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 CYP4F12Q9HCS2 524 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 FETUBQ9UGM5 382 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 FKBPLQ9UIM3 349 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 MOSPD1Q9UJG1 213 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 BTBD3Q9Y2F9 522 aa19.94■□□□□ 0.78
ATG4D-208ENST00000588667 OAS3Q9Y6K5 1087 aaKnown RBP19.94■□□□□ 0.78
ATG4D-208ENST00000588667 ARHGEF17Q96PE2 2063 aaPredicted RBP19.94■□□□□ 0.78
ATG4D-208ENST00000588667 MAGEB16A2A368 324 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 SMIM23A6NLE4 172 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 RGS16O15492 202 aaPredicted RBP19.93■□□□□ 0.78
ATG4D-208ENST00000588667 SLC25A14O95258 325 aaPredicted RBP19.93■□□□□ 0.78
ATG4D-208ENST00000588667 PRAMEF1O95521 474 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 ADRA1DP25100 572 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 CHRNA6Q15825 494 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 TTMPQ5BVD1 217 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 DEFB124Q8NES8 71 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 GSDMBQ8TAX9 411 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 LMX1AQ8TE12 382 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 RHBDD1Q8TEB9 315 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 FBF1Q8TES7 1133 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 SCARF2Q96GP6 870 aaPredicted RBP19.93■□□□□ 0.78
ATG4D-208ENST00000588667 CYTH2Q99418 400 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 CARS2Q9HA77 564 aaKnown RBP19.93■□□□□ 0.78
ATG4D-208ENST00000588667 NLE1Q9NVX2 485 aaPredicted RBP19.93■□□□□ 0.78
ATG4D-208ENST00000588667 SMOXQ9NWM0 555 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 SYBUQ9NX95 663 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 RABGEF1Q9UJ41 708 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 TMEM98Q9Y2Y6 226 aa19.93■□□□□ 0.78
ATG4D-208ENST00000588667 TCRBV9S1A1TA0A576 114 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 H7C0S8 307 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 SCAMP1O15126 338 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 CBFA2T3O75081 653 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 CDH16O75309 829 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 ASMTLO95671 621 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 CTSEP14091 401 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 PSMA3P25788 255 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 SLCO1A2P46721 670 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 POLD2P49005 469 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 XIAPP98170 497 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 UNC5AQ6ZN44 842 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 SDR16C5Q8N3Y7 309 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 RIBC1Q8N443 379 aaPredicted RBP19.92■□□□□ 0.78
ATG4D-208ENST00000588667 BAHD1Q8TBE0 780 aaPredicted RBP19.92■□□□□ 0.78
ATG4D-208ENST00000588667 CAMK1GQ96NX5 476 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 RIMKLBQ9ULI2 386 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 SUFUQ9UMX1 484 aa19.92■□□□□ 0.78
ATG4D-208ENST00000588667 DCDC2BA2VCK2 349 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 SRP72O76094 671 aaKnown RBP19.91■□□□□ 0.78
ATG4D-208ENST00000588667 FUCA1P04066 466 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 POLBP06746 335 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 CRADDP78560 199 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 TMPRSS15P98073 1019 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 ELOCQ15369 112 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 SKIDA1Q1XH10 827 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 STEAP4Q687X5 459 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 NLRP9Q7RTR0 991 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 EID2Q8N6I1 236 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 PPHLN1Q8NEY8 458 aaKnown RBP19.91■□□□□ 0.78
ATG4D-208ENST00000588667 OR4C6Q8NH72 309 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 CDC6Q99741 560 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 TRIM39Q9HCM9 518 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 NLGN3Q9NZ94 848 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 SLC24A2Q9UI40 661 aa19.91■□□□□ 0.78
ATG4D-208ENST00000588667 TMPRSS11EQ9UL52 423 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms