RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 SLCO1A2P46721 670 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 NPY2RP49146 381 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 DUSP3P51452 185 aaPredicted RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 CCNHP51946 323 aaPredicted RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 UCNP55089 124 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 OXCT1P55809 520 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 GNGT1P63211 74 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 IL10RBQ08334 325 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 CDH17Q12864 832 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 MPP3Q13368 585 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 LAMB3Q13751 1172 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 RFTN1Q14699 578 aaPredicted RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 FASTKD3Q14CZ7 662 aaKnown RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 TMED2Q15363 201 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 NR0B2Q15466 257 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 SLC14A2Q15849 920 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 SPANXN3Q5MJ09 141 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 ATXN7L2Q5T6C5 722 aaPredicted RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 ZCCHC8Q6NZY4 707 aaKnown RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 NEK5Q6P3R8 708 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 CASC4Q6P4E1 433 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 RBM44Q6ZP01 1051 aaKnown RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 SETD3Q86TU7 594 aaPredicted RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 VASH2Q86V25 355 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 CAND1Q86VP6 1230 aaKnown RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 NLRP14Q86W24 1093 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 PARGQ86W56 976 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 LRRC6Q86X45 466 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 ANKMY2Q8IV38 441 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 LSMEM2Q8N112 164 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 RYBPQ8N488 228 aaPredicted RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 DCAF4L2Q8NA75 395 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 FBF1Q8TES7 1133 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 MAML1Q92585 1016 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 FUBP1Q96AE4 644 aaKnown RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 SGSM3Q96HU1 749 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 FCRL5Q96RD9 977 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 IL12RB2Q99665 862 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 SELENOSQ9BQE4 189 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 CCDC3Q9BQI4 270 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 C2orf49Q9BVC5 232 aaPredicted RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 FSD1LQ9BXM9 530 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 DPH1Q9BZG8 443 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 NSRP1Q9H0G5 558 aaKnown RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 MAGEH1Q9H213 219 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 C10orf88Q9H8K7 445 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 ATP13A1Q9HD20 1204 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 INTS9Q9NV88 658 aaKnown RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 EURLQ9NYK6 297 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 TXNDC16Q9P2K2 825 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 GULP1Q9UBP9 304 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 ZNF212Q9UDV6 495 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 APOBEC3BQ9UH17 382 aaKnown RBP7.8□□□□□ -1.16
VMP1-204ENST00000587259 MFHAS1Q9Y4C4 1052 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 MAD1L1Q9Y6D9 718 aa7.8□□□□□ -1.16
VMP1-204ENST00000587259 ZNF106Q9H2Y7 1883 aaKnown RBP7.79□□□□□ -1.16
VMP1-204ENST00000587259 CXorf51AA0A1B0GTR3 108 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 TCRBV7S3A2A0A539 114 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 C16orf96A6NNT2 1141 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 POC1B-GALNT4F8VUJ3 575 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 KCNK1O00180 336 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 NEMP1O14524 444 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 FPGTO14772 594 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 YY2O15391 372 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 PRPF4O43172 522 aaKnown RBP eCLIP7.79□□□□□ -1.16
VMP1-204ENST00000587259 NOBOXO60393 691 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 MAFKO60675 156 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 MMP20O60882 483 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 USP1O94782 785 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 ZWINTO95229 277 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 UGT2B4P06133 528 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 BRAFP15056 766 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 PAMP19021 973 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 ITIH1P19827 911 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 CES1P23141 567 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 ITGB7P26010 798 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 SSTR1P30872 391 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 SLC5A2P31639 672 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 LSP1P33241 339 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 RECQLP46063 649 aaPredicted RBP7.79□□□□□ -1.16
VMP1-204ENST00000587259 RABIFP47224 123 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 SERPINH1P50454 418 aaKnown RBP7.79□□□□□ -1.16
VMP1-204ENST00000587259 ATP1A2P50993 1020 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 GPX6P59796 221 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 PFN3P60673 137 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 RPS21P63220 83 aaKnown RBP7.79□□□□□ -1.16
VMP1-204ENST00000587259 CCL7P80098 99 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 SGCGQ13326 291 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 POLD3Q15054 466 aaPredicted RBP7.79□□□□□ -1.16
VMP1-204ENST00000587259 MSS51Q4VC12 460 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 CARD16Q5EG05 197 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 FAXCQ5TGI0 409 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 MARC1Q5VT66 337 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 STEAP4Q687X5 459 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 KCTD11Q693B1 232 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 ZNF534Q76KX8 674 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 ZNF771Q7L3S4 317 aaPredicted RBP7.79□□□□□ -1.16
VMP1-204ENST00000587259 RD3Q7Z3Z2 195 aa7.79□□□□□ -1.16
VMP1-204ENST00000587259 TRABD2AQ86V40 505 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms