RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 COL4A3Q01955 1670 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 PRRT4C9JH25 899 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 SDHDO14521 159 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 UBFD1O14562 309 aaKnown RBP22.03■■□□□ 1.12
CIRBP-208ENST00000586548 DCXO43602 365 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 SIX3O95343 332 aaPredicted RBP22.03■■□□□ 1.12
CIRBP-208ENST00000586548 CPA2P48052 419 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 RGS4P49798 205 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 MNAT1P51948 309 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 DCDC1P59894 354 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 ATP13A5Q4VNC0 1218 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 RFLNAQ6ZTI6 216 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 ADAMTSL2Q86TH1 951 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 GPSM1Q86YR5 675 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 TMPRSS6Q8IU80 811 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 CLDN19Q8N6F1 224 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 LKAAEAR1Q8TD35 194 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 PPP1R36Q96LQ0 422 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 COPS8Q99627 209 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 MEAF6Q9HAF1 191 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 PCDH12Q9NPG4 1184 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 HPS4Q9NQG7 708 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 RAD18Q9NS91 495 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 CDH22Q9UJ99 828 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 CDH7Q9ULB5 785 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 TRAF6Q9Y4K3 522 aa22.03■■□□□ 1.12
CIRBP-208ENST00000586548 IGLV3-16A0A075B6K0 115 aa22.02■■□□□ 1.12
CIRBP-208ENST00000586548 OTOL1A6NHN0 477 aaPredicted RBP22.02■■□□□ 1.12
CIRBP-208ENST00000586548 SLC22A2O15244 555 aa22.02■■□□□ 1.12
CIRBP-208ENST00000586548 GSC2O15499 205 aa22.02■■□□□ 1.12
CIRBP-208ENST00000586548 SLC25A14O95258 325 aaPredicted RBP22.02■■□□□ 1.12
CIRBP-208ENST00000586548 RPS17P08708 135 aaKnown RBP22.02■■□□□ 1.12
CIRBP-208ENST00000586548 EEF1DP29692 281 aaKnown RBP22.02■■□□□ 1.12
CIRBP-208ENST00000586548 HNRNPH1P31943 449 aaKnown RBP22.02■■□□□ 1.12
CIRBP-208ENST00000586548 INHBCP55103 352 aa22.02■■□□□ 1.12
CIRBP-208ENST00000586548 BTKQ06187 659 aa22.02■■□□□ 1.12
CIRBP-208ENST00000586548 TANGO2Q6ICL3 276 aa22.02■■□□□ 1.12
CIRBP-208ENST00000586548 ANKRD54Q6NXT1 300 aa22.02■■□□□ 1.12
CIRBP-208ENST00000586548 SYCE2Q6PIF2 218 aa22.02■■□□□ 1.12
CIRBP-208ENST00000586548 DPPA4Q7L190 304 aa22.02■■□□□ 1.12
CIRBP-208ENST00000586548 DTX3LQ8TDB6 740 aa22.02■■□□□ 1.12
CIRBP-208ENST00000586548 CMTM5Q96DZ9 223 aa22.02■■□□□ 1.12
CIRBP-208ENST00000586548 ZFP14Q9HCL3 533 aa22.02■■□□□ 1.12
CIRBP-208ENST00000586548 LATS2Q9NRM7 1088 aa22.02■■□□□ 1.12
CIRBP-208ENST00000586548 NUDT4Q9NZJ9 180 aa22.02■■□□□ 1.12
CIRBP-208ENST00000586548 NFKBIL1Q9UBC1 381 aaPredicted RBP22.02■■□□□ 1.12
CIRBP-208ENST00000586548 PLXNA2O75051 1894 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 C16orf96A6NNT2 1141 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 ATP6V1G2O95670 118 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 XPAP23025 273 aaPredicted RBP22.01■■□□□ 1.11
CIRBP-208ENST00000586548 DGKAP23743 735 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 MESP2Q0VG99 397 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 HYAL1Q12794 435 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 KLF10Q13118 480 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 NAA25Q14CX7 972 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 CRY1Q16526 586 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 ANKS6Q68DC2 871 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 VITQ6UXI7 678 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 PHTF2Q8N3S3 785 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 ZBTB2Q8N680 514 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 CPSF7Q8N684 471 aaKnown RBP22.01■■□□□ 1.11
CIRBP-208ENST00000586548 ZNF366Q8N895 744 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 CEP70Q8NHQ1 597 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 C1orf21Q9H246 121 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 SPATS2LQ9NUQ6 558 aaKnown RBP22.01■■□□□ 1.11
CIRBP-208ENST00000586548 SMOXQ9NWM0 555 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 KLHL42Q9P2K6 505 aa22.01■■□□□ 1.11
CIRBP-208ENST00000586548 LRRC14BA6NHZ5 514 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 RFXAPO00287 272 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 SKAP2O75563 359 aaPredicted RBP22■■□□□ 1.11
CIRBP-208ENST00000586548 CDK14O94921 469 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 TRIM16O95361 564 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 FGF4P08620 206 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 ADSLP30566 484 aaPredicted RBP22■■□□□ 1.11
CIRBP-208ENST00000586548 HK3P52790 923 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 CDH13P55290 713 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 FCHO2Q0JRZ9 810 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 DNAL1Q4LDG9 190 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 FNDC3BQ53EP0 1204 aaKnown RBP22■■□□□ 1.11
CIRBP-208ENST00000586548 GPRC6AQ5T6X5 926 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 NXNQ6DKJ4 435 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 CPA6Q8N4T0 437 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 RBM15BQ8NDT2 890 aaKnown RBP22■■□□□ 1.11
CIRBP-208ENST00000586548 ACTRT2Q8TDY3 377 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 MCUR1Q96AQ8 359 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 PANX3Q96QZ0 392 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 MMADHCQ9H3L0 296 aaPredicted RBP22■■□□□ 1.11
CIRBP-208ENST00000586548 NSUN3Q9H649 340 aaKnown RBP22■■□□□ 1.11
CIRBP-208ENST00000586548 ZNF385DQ9H6B1 395 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 FIS1Q9Y3D6 152 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 EDDM13A0A1B0GTR0 161 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 LINC01565O15544 149 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 SNX2O60749 519 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 PRNPP04156 253 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 ITGB6P18564 788 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 TSPAN8P19075 237 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 COPAP53621 1224 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 CLCQ05315 142 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 LCP2Q13094 533 aa22■■□□□ 1.11
CIRBP-208ENST00000586548 TGFBIQ15582 683 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms