RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 PPARGP37231 505 aaPredicted RBP20.23■□□□□ 0.83
ATG4D-204ENST00000586417 RALGDSQ12967 914 aa20.23■□□□□ 0.83
ATG4D-204ENST00000586417 CAMK2GQ13555 558 aaPredicted RBP20.23■□□□□ 0.83
ATG4D-204ENST00000586417 LYPLAL1Q5VWZ2 237 aa20.23■□□□□ 0.83
ATG4D-204ENST00000586417 ZDHHC20Q5W0Z9 365 aa20.23■□□□□ 0.83
ATG4D-204ENST00000586417 PARS2Q7L3T8 475 aaKnown RBP20.23■□□□□ 0.83
ATG4D-204ENST00000586417 RBFAQ8N0V3 343 aa20.23■□□□□ 0.83
ATG4D-204ENST00000586417 SIDT2Q8NBJ9 832 aaKnown RBP20.23■□□□□ 0.83
ATG4D-204ENST00000586417 PPP4R1Q8TF05 950 aa20.23■□□□□ 0.83
ATG4D-204ENST00000586417 DERL2Q9GZP9 239 aa20.23■□□□□ 0.83
ATG4D-204ENST00000586417 ACSS2Q9NR19 701 aa20.23■□□□□ 0.83
ATG4D-204ENST00000586417 PNPOQ9NVS9 261 aa20.23■□□□□ 0.83
ATG4D-204ENST00000586417 C2orf42Q9NWW7 574 aa20.23■□□□□ 0.83
ATG4D-204ENST00000586417 CRLS1Q9UJA2 301 aa20.23■□□□□ 0.83
ATG4D-204ENST00000586417 HGSO14964 777 aaPredicted RBP20.22■□□□□ 0.83
ATG4D-204ENST00000586417 TSPAN12O95859 305 aa20.22■□□□□ 0.83
ATG4D-204ENST00000586417 PDGFBP01127 241 aaPredicted RBP20.22■□□□□ 0.83
ATG4D-204ENST00000586417 HOXB2P14652 356 aa20.22■□□□□ 0.83
ATG4D-204ENST00000586417 CLCN7P51798 805 aa20.22■□□□□ 0.83
ATG4D-204ENST00000586417 CORO7P57737 925 aa20.22■□□□□ 0.83
ATG4D-204ENST00000586417 RCN2Q14257 317 aa20.22■□□□□ 0.83
ATG4D-204ENST00000586417 ELAVL3Q14576 367 aaKnown RBP20.22■□□□□ 0.83
ATG4D-204ENST00000586417 E2F5Q15329 346 aa20.22■□□□□ 0.83
ATG4D-204ENST00000586417 OR4D1Q15615 310 aa20.22■□□□□ 0.83
ATG4D-204ENST00000586417 ATP13A5Q4VNC0 1218 aa20.22■□□□□ 0.83
ATG4D-204ENST00000586417 SDE2Q6IQ49 451 aa20.22■□□□□ 0.83
ATG4D-204ENST00000586417 TMEM92Q6UXU6 159 aa20.22■□□□□ 0.83
ATG4D-204ENST00000586417 DPPA4Q7L190 304 aa20.22■□□□□ 0.83
ATG4D-204ENST00000586417 RHEBL1Q8TAI7 183 aa20.22■□□□□ 0.83
ATG4D-204ENST00000586417 MYLK2Q9H1R3 596 aa20.22■□□□□ 0.83
ATG4D-204ENST00000586417 TFB2MQ9H5Q4 396 aaKnown RBP20.22■□□□□ 0.83
ATG4D-204ENST00000586417 CD248Q9HCU0 757 aa20.22■□□□□ 0.83
ATG4D-204ENST00000586417 TRMT6Q9UJA5 497 aaKnown RBP20.22■□□□□ 0.83
ATG4D-204ENST00000586417 IKZF3Q9UKT9 509 aa20.22■□□□□ 0.83
ATG4D-204ENST00000586417 IQCF5A8MTL0 148 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 HSPA4LO95757 839 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 PRNPP04156 253 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 CHRNGP07510 517 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 CCR10P46092 362 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 AQP5P55064 265 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 ARHGEF7Q14155 803 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 MAVSQ7Z434 540 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 HSD11B1LQ7Z5J1 315 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 TTC7BQ86TV6 843 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 CACUL1Q86Y37 369 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 MMAAQ8IVH4 418 aaKnown RBP20.21■□□□□ 0.83
ATG4D-204ENST00000586417 LSMEM2Q8N112 164 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 ZNF781Q8N8C0 355 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 GBP7Q8N8V2 638 aaPredicted RBP20.21■□□□□ 0.83
ATG4D-204ENST00000586417 OR8D1Q8WZ84 308 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 LRRC37BQ96QE4 947 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 TTC1Q99614 292 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 SIKE1Q9BRV8 207 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 CLPBQ9H078 707 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 SLC6A17Q9H1V8 727 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 PKD2L2Q9NZM6 624 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 PPM1HQ9ULR3 514 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 SLC12A4Q9UP95 1085 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 PRSS21Q9Y6M0 314 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 GOLGA8CPA6NN73 597 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 ZNF195O14628 629 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 SYNCRIPO60506 623 aaKnown RBP20.21■□□□□ 0.83
ATG4D-204ENST00000586417 IPO13O94829 963 aaKnown RBP20.21■□□□□ 0.83
ATG4D-204ENST00000586417 ALOX15P16050 662 aaPredicted RBP20.21■□□□□ 0.83
ATG4D-204ENST00000586417 CHRM3P20309 590 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 MMP12P39900 470 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 SKIV2L2P42285 1042 aaKnown RBP20.21■□□□□ 0.83
ATG4D-204ENST00000586417 ASPHQ12797 758 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 TRMT11Q7Z4G4 463 aaKnown RBP20.21■□□□□ 0.83
ATG4D-204ENST00000586417 NKAPQ8N5F7 415 aaKnown RBP20.21■□□□□ 0.83
ATG4D-204ENST00000586417 TMIEQ8NEW7 156 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 FLCNQ8NFG4 579 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 PJA1Q8NG27 643 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 EDAQ92838 391 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 KIAA1191Q96A73 305 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 SKA1Q96BD8 255 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 ERP27Q96DN0 273 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 CCDC126Q96EE4 140 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 TMEM237Q96Q45 408 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 ATOH8Q96SQ7 321 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 NELL2Q99435 816 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 MKRN2Q9H000 416 aaKnown RBP20.21■□□□□ 0.83
ATG4D-204ENST00000586417 HEY2Q9UBP5 337 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 HAO1Q9UJM8 370 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 TMPRSS11EQ9UL52 423 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 MMP17Q9ULZ9 603 aa20.21■□□□□ 0.83
ATG4D-204ENST00000586417 PLXNA2O75051 1894 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 KPNA3O00505 521 aaPredicted RBP20.2■□□□□ 0.82
ATG4D-204ENST00000586417 SPINT1O43278 529 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 NPHS1O60500 1241 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 NFKBIAP25963 317 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 COPAP53621 1224 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 ATP6V0D1P61421 351 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 NFKB2Q00653 900 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 SIGLEC14Q08ET2 396 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 LRRC32Q14392 662 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 SETDB1Q15047 1291 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 ARL13AQ5H913 290 aaPredicted RBP20.2■□□□□ 0.82
ATG4D-204ENST00000586417 TRIM67Q6ZTA4 783 aa20.2■□□□□ 0.82
ATG4D-204ENST00000586417 PIWIL4Q7Z3Z4 852 aaKnown RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms