RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 LHX9Q9NQ69 397 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 PKD2L2Q9NZM6 624 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 PLEKHB1Q9UF11 243 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-225ENST00000586385 AMACRQ9UHK6 382 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 LNPEPQ9UIQ6 1025 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 ANAPC7Q9UJX3 599 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 DNAJC16Q9Y2G8 782 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 WDR37Q9Y2I8 494 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 PCDHB3Q9Y5E6 796 aa11.69□□□□□ -0.54
BRCA1-225ENST00000586385 IGHV5-51A0A0C4DH38 117 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 PIPSLA2A3N6 862 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 SLC25A14O95258 325 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-225ENST00000586385 RECKO95980 971 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 VIPP01282 170 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 JCHAINP01591 159 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 CYP1A2P05177 515 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 FOLR1P15328 257 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 AMD1P17707 334 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 NELFEP18615 380 aaKnown RBP11.68□□□□□ -0.54
BRCA1-225ENST00000586385 RPL10P27635 214 aaKnown RBP11.68□□□□□ -0.54
BRCA1-225ENST00000586385 DRG2P55039 364 aaKnown RBP11.68□□□□□ -0.54
BRCA1-225ENST00000586385 TAS2R40P59535 323 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 DCDC1P59894 354 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 RPS18P62269 152 aaKnown RBP11.68□□□□□ -0.54
BRCA1-225ENST00000586385 CHAF1BQ13112 559 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 KCNAB1Q14722 419 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 NADK2Q4G0N4 442 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 TDRD12Q587J7 1177 aaKnown RBP11.68□□□□□ -0.54
BRCA1-225ENST00000586385 ZNF569Q5MCW4 686 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 CACHD1Q5VU97 1274 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 TIGD7Q6NT04 549 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-225ENST00000586385 PWWP2BQ6NUJ5 590 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 FAM199XQ6PEV8 388 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-225ENST00000586385 FAM92BQ6ZTR7 304 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 TMC3Q7Z5M5 1100 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 RASGRP3Q8IV61 690 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 TRAM1L1Q8N609 369 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 GLYATL1Q969I3 302 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 TADA1Q96BN2 335 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 SLC41A2Q96JW4 573 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 NUP85Q9BW27 656 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 SPATA16Q9BXB7 569 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 ACTL8Q9H568 366 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 MLXIPLQ9NP71 852 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 NFKBIL1Q9UBC1 381 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-225ENST00000586385 EPHA6Q9UF33 1036 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 IP6K2Q9UHH9 426 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 KCND3Q9UK17 655 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 PADI1Q9ULC6 663 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 SHOC2Q9UQ13 582 aa11.68□□□□□ -0.54
BRCA1-225ENST00000586385 MYO9AB2RTY4 2548 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 GPR89AB7ZAQ6 455 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 KCNK1O00180 336 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 AURKAO14965 403 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 RASSF9O75901 435 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 SORBS2O94875 1100 aaKnown RBP11.67□□□□□ -0.54
BRCA1-225ENST00000586385 GPR89BP0CG08 455 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 BPIP17213 487 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 CA5AP35218 305 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 IL10RAQ13651 578 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 PRR30Q53SZ7 412 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-225ENST00000586385 CCDC122Q5T0U0 273 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 AGAP9Q5VTM2 703 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 SASS6Q6UVJ0 657 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 WASH2PQ6VEQ5 465 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 LRRTM4Q86VH4 590 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 GALNT11Q8NCW6 608 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 GPR150Q8NGU9 434 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 CCHCR1Q8TD31 782 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 HDAC11Q96DB2 347 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 ZNF670Q9BS34 389 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 TIMM29Q9BSF4 260 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 CEP41Q9BYV8 373 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 ZFYVE1Q9HBF4 777 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 WASH6PQ9NQA3 447 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 POT1Q9NUX5 634 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 NENFQ9UMX5 172 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 MAP4K5Q9Y4K4 846 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 SPO11Q9Y5K1 396 aa11.67□□□□□ -0.54
BRCA1-225ENST00000586385 A0A087X0T9 212 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 A0A1B0GTH6 734 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 PDZK1P1A8MUH7 402 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 C21orf140B9A014 251 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 KMOO15229 486 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 FAM228BP0C875 321 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 CA4P22748 312 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 GJC1P36383 396 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 IFI35P80217 286 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-225ENST00000586385 PPIDQ08752 370 aaKnown RBP11.66□□□□□ -0.54
BRCA1-225ENST00000586385 UGT8Q16880 541 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 INSCQ1MX18 579 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 PAPD7Q5XG87 772 aaKnown RBP11.66□□□□□ -0.54
BRCA1-225ENST00000586385 IRGCQ6NXR0 463 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 PPP1R3BQ86XI6 285 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 TRIM48Q8IWZ4 208 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 Q8NA96 180 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 CPT1CQ8TCG5 803 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 ZSCAN5AQ9BUG6 496 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 RAB33BQ9H082 229 aa11.66□□□□□ -0.54
BRCA1-225ENST00000586385 TRIM10Q9UDY6 481 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms