RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ZFRQ96KR1 1074 aaKnown RBP10.18□□□□□ -0.78
RFFL-212ENST00000584655 TSSK3Q96PN8 268 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 TREX1Q9NSU2 369 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 NOP53Q9NZM5 478 aaKnown RBP10.18□□□□□ -0.78
RFFL-212ENST00000584655 USP22Q9UPT9 525 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 ALPK2Q86TB3 2170 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 TULP3O75386 442 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 PAK4O96013 591 aaPredicted RBP10.18□□□□□ -0.78
RFFL-212ENST00000584655 CXCL10P02778 98 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 S100BP04271 92 aaPredicted RBP10.18□□□□□ -0.78
RFFL-212ENST00000584655 DHRS4L1P0CG22 281 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 GDI1P31150 447 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 DGKGP49619 791 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 STC1P52823 247 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 FASTKQ14296 549 aaKnown RBP10.18□□□□□ -0.78
RFFL-212ENST00000584655 CRY1Q16526 586 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 NRF1Q16656 503 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 CCDC153Q494R4 210 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 SYTL3Q4VX76 610 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 TPGS2Q68CL5 300 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 ANKRD26P1Q6NSI1 321 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 PLD3Q8IV08 490 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 SLC44A2Q8IWA5 706 aaPredicted RBP10.18□□□□□ -0.78
RFFL-212ENST00000584655 TCEAL8Q8IYN2 117 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 CLEC4FQ8N1N0 589 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 FGF13Q92913 245 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 UHRF1Q96T88 793 aaPredicted RBP10.18□□□□□ -0.78
RFFL-212ENST00000584655 PRKD2Q9BZL6 878 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 ZBP1Q9H171 429 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 ACTR8Q9H981 624 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 TAGLN3Q9UI15 199 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 ADAMTS6Q9UKP5 1117 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 SARDHQ9UL12 918 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 BACE2Q9Y5Z0 518 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 CCDC160A6NGH7 325 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 MAP3K13O43283 966 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 COX4I1P13073 169 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 LHCGRP22888 699 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 SNRPD1P62314 119 aaKnown RBP10.18□□□□□ -0.78
RFFL-212ENST00000584655 YBX1P67809 324 aaKnown RBP10.18□□□□□ -0.78
RFFL-212ENST00000584655 DLX2Q07687 328 aaPredicted RBP10.18□□□□□ -0.78
RFFL-212ENST00000584655 PPIGQ13427 754 aaKnown RBP eCLIP10.18□□□□□ -0.789e-12■■■■□ 24.8
RFFL-212ENST00000584655 IER5LQ5T953 404 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 SPAG17Q6Q759 2223 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.18□□□□□ -0.78
RFFL-212ENST00000584655 ULK2Q8IYT8 1036 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 GABPB2Q8TAK5 448 aaPredicted RBP10.18□□□□□ -0.78
RFFL-212ENST00000584655 PPM1MQ96MI6 270 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 TMEM74Q96NL1 305 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 IL17FQ96PD4 163 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 DYRK4Q9NR20 520 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 IGSF5Q9NSI5 407 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 SLC7A8Q9UHI5 535 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 PPM1HQ9ULR3 514 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 NDRG2Q9UN36 371 aaKnown RBP10.18□□□□□ -0.78
RFFL-212ENST00000584655 CUL9Q8IWT3 2517 aa10.18□□□□□ -0.78
RFFL-212ENST00000584655 DRGXA6NNA5 263 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 NTRK1P04629 796 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 ASGR2P07307 311 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 CRABP2P29373 138 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 MLLT1Q03111 559 aaPredicted RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 MPPE1Q53F39 396 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 TANGO2Q6ICL3 276 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 GALNT10Q86SR1 603 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 PLD4Q96BZ4 506 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 RSPRY1Q96DX4 576 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 MRPL57Q9BQC6 102 aaKnown RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 SUV39H2Q9H5I1 410 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 COPS7BQ9H9Q2 264 aaPredicted RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 PRMT5O14744 637 aaPredicted RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 SYNCRIPO60506 623 aaKnown RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 CAPN1P07384 714 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 ELFN1P0C7U0 828 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 TPBGLP0DKB5 382 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 ZNF37AP17032 561 aaPredicted RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 GRK2P25098 689 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 MAGEA10P43363 369 aaPredicted RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 GSSP48637 474 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 POLD2P49005 469 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 C22orf39Q6P5X5 142 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 ZYG11AQ6WRX3 759 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 ZBTB46Q86UZ6 589 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 VRK3Q8IV63 474 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 SYTL1Q8IYJ3 562 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 TSPAN17Q96FV3 270 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 MACROD1Q9BQ69 325 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 OR2AG1Q9H205 316 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 FAM124BQ9H5Z6 455 aaPredicted RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 CCDC134Q9H6E4 229 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 SPHK2Q9NRA0 654 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 KCNK4Q9NYG8 393 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 LHX3Q9UBR4 397 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 YBX2Q9Y2T7 364 aaKnown RBP10.17□□□□□ -0.78
RFFL-212ENST00000584655 GREB1Q4ZG55 1949 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 PRRT4C9JH25 899 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 XYLBO75191 536 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 RASSF9O75901 435 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 SMNDC1O75940 238 aaKnown RBP eCLIP10.17□□□□□ -0.78
RFFL-212ENST00000584655 PCCBP05166 539 aa10.17□□□□□ -0.78
RFFL-212ENST00000584655 PYGLP06737 847 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms