RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 PPIL1Q9Y3C6 166 aa15.5■□□□□ 0.07
SKA2-209ENST00000583976 ZNF106Q9H2Y7 1883 aaKnown RBP15.49■□□□□ 0.07
SKA2-209ENST00000583976 A8MU76 341 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 F5H423 210 aaPredicted RBP15.49■□□□□ 0.07
SKA2-209ENST00000583976 KCNN4O15554 427 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 MTSS1O43312 755 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 SUV39H1O43463 412 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 DUX1O43812 170 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 PPFIA2O75334 1257 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 CSTF2P33240 577 aaKnown RBP eCLIP15.49■□□□□ 0.07
SKA2-209ENST00000583976 FASLGP48023 281 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 PTSQ03393 145 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 NIPAL4Q0D2K0 466 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 NFATC2Q13469 925 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 SNX1Q13596 522 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 CLPPQ16740 277 aaPredicted RBP15.49■□□□□ 0.07
SKA2-209ENST00000583976 ATG14Q6ZNE5 492 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 PID1Q7Z2X4 250 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 PTRH1Q86Y79 214 aaKnown RBP15.49■□□□□ 0.07
SKA2-209ENST00000583976 CDKL3Q8IVW4 592 aaPredicted RBP15.49■□□□□ 0.07
SKA2-209ENST00000583976 SFRP1Q8N474 314 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 LPCAT1Q8NF37 534 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 ARRDC2Q8TBH0 407 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 COG1Q8WTW3 980 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 PBKQ96KB5 322 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 OSBPL9Q96SU4 736 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 DDA1Q9BW61 102 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 KCTD5Q9NXV2 234 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 SLC39A1Q9NY26 324 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 KLHL8Q9P2G9 620 aaPredicted RBP15.49■□□□□ 0.07
SKA2-209ENST00000583976 IL17BQ9UHF5 180 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 AMACRQ9UHK6 382 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 DNPEPQ9ULA0 475 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 FLNCQ14315 2725 aa15.49■□□□□ 0.07
SKA2-209ENST00000583976 FADS2P1A8MWK0 482 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 ZNF185O15231 689 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 DNAJC6O75061 913 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 ASMTLO95671 621 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 ACP5P13686 325 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 NFKBIAP25963 317 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 CD86P42081 329 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 MAPK9P45984 424 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 POLE2P56282 527 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 TRA2AQ13595 282 aaKnown RBP eCLIP15.48■□□□□ 0.07
SKA2-209ENST00000583976 RALGPS1Q5JS13 557 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.48■□□□□ 0.07
SKA2-209ENST00000583976 ZNF765Q7L2R6 523 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 NRSN1Q8IZ57 195 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 UNC5BQ8IZJ1 945 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 CACNA2D3Q8IZS8 1091 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 ZNF567Q8N184 647 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 TEKT5Q96M29 485 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 SLC38A3Q99624 504 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 NAPGQ99747 312 aaPredicted RBP15.48■□□□□ 0.07
SKA2-209ENST00000583976 FERMT1Q9BQL6 677 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 TMEM121Q9BTD3 319 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 B3GNT4Q9C0J1 378 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 APMAPQ9HDC9 416 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 ARFGAP3Q9NP61 516 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 GEMIN8Q9NWZ8 242 aaKnown RBP15.48■□□□□ 0.07
SKA2-209ENST00000583976 SMARCAL1Q9NZC9 954 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 TBC1D29Q9UFV1 150 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 SNX12Q9UMY4 172 aa15.48■□□□□ 0.07
SKA2-209ENST00000583976 A6NCN8 305 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 LIASO43766 372 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 CLDN7O95471 211 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 PRLP01236 227 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 PRKAR1AP10644 381 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 NFKB1P19838 968 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 CD68P34810 354 aaPredicted RBP15.47■□□□□ 0.07
SKA2-209ENST00000583976 EPHB1P54762 984 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 HHEXQ03014 270 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 TLE1Q04724 770 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 SIX1Q15475 284 aaPredicted RBP15.47■□□□□ 0.07
SKA2-209ENST00000583976 ALG1LQ6GMV1 187 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 TMEM71Q6P5X7 295 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 BORAQ6PGQ7 559 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 KDELC2Q7Z4H8 507 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 FAM71DQ8N9W8 422 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 SPATA22Q8NHS9 363 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 SLC35B2Q8TB61 432 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 RTP4Q96DX8 246 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 SLC25A18Q9H1K4 315 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 GLOD4Q9HC38 313 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 UBP1Q9NZI7 540 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 KLHL3Q9UH77 587 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 CNOT6Q9ULM6 557 aaKnown RBP15.47■□□□□ 0.07
SKA2-209ENST00000583976 DOPEY2Q9Y3R5 2298 aa15.47■□□□□ 0.07
SKA2-209ENST00000583976 C1orf232A0A0U1RR37 186 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 CTAGE9A4FU28 777 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 B4E171 279 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 SNX2O60749 519 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 STK10O94804 968 aaKnown RBP15.46■□□□□ 0.07
SKA2-209ENST00000583976 SLC4A1P02730 911 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 MMP2P08253 660 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 ZNF30P17039 623 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 CES1P23141 567 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 TSPAN7P41732 249 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 GDF10P55107 478 aa15.46■□□□□ 0.07
SKA2-209ENST00000583976 GPLD1P80108 840 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms