RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 TMEM115Q12893 351 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 KRT71Q3SY84 523 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 KHDC1Q4VXA5 237 aaKnown RBP16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ZNF648Q5T619 568 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ZNF549Q6P9A3 640 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 C11orf74Q86VG3 221 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 HEATR4Q86WZ0 1026 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 SLC41A1Q8IVJ1 513 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 RBFAQ8N0V3 343 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CYP4X1Q8N118 509 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 RIBC1Q8N443 379 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 TMEM145Q8NBT3 493 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 GDAP1Q8TB36 358 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 GAB3Q8WWW8 586 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 FOXJ1Q92949 421 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 FUBP1Q96AE4 644 aaKnown RBP16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ZBTB9Q96C00 473 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CCDC97Q96F63 343 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 BIRC8Q96P09 236 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 LGR4Q9BXB1 951 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CTNNAL1Q9UBT7 734 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 LGALS13Q9UHV8 139 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CA5BQ9Y2D0 317 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 PRSS21Q9Y6M0 314 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 RALGAPA1Q6GYQ0 2036 aa16.17■□□□□ 0.18
CDK5RAP3-228ENST00000583363 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 MTX2O75431 263 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 KRT38O76015 456 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ITGA2BP08514 1039 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 SNRPAP09012 282 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ATP1B2P14415 290 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 MSH3P20585 1137 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 POLD2P49005 469 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 LIMK2P53671 638 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 PFN3P60673 137 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 MROH9Q5TGP6 573 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 LAIR1Q6GTX8 287 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 KDM7AQ6ZMT4 941 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 GCNT7Q6ZNI0 430 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ADGRG6Q86SQ4 1221 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 PHYKPLQ8IUZ5 450 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 TMEFF1Q8IYR6 380 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CNPY4Q8N129 248 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 DNASE2BQ8WZ79 361 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 DCUN1D1Q96GG9 259 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 VPS39Q96JC1 886 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 SERAC1Q96JX3 654 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 RUFY1Q96T51 708 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 MYOCQ99972 504 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 AARSD1Q9BTE6 412 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 WDR26Q9H7D7 661 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 TMBIM4Q9HC24 238 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 PHPT1Q9NRX4 125 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 TBK1Q9UHD2 729 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 RAB23Q9ULC3 237 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CORO1CQ9ULV4 474 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 VWA7Q9Y334 891 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 OR1A2Q9Y585 309 aa16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 OAS3Q9Y6K5 1087 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP3-228ENST00000583363 IQANK1A0A1B0GTG1 560 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 UBA6A0AVT1 1052 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CFAP99D6REC4 459 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 TOR1BO14657 336 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ESR1P03372 595 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 RALBP11234 206 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 PKMP14618 531 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CNR2P34972 360 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 YPEL5P62699 121 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 SRSF5Q13243 272 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CTSL3PQ5NE16 218 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 HECTD2Q5U5R9 776 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 MACC1Q6ZN28 852 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 TIFABQ6ZNK6 161 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 PRR23BQ6ZRT6 265 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 LPCAT2Q7L5N7 544 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 TAOK1Q7L7X3 1001 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ABI3BPQ7Z7G0 1075 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 TRIM74Q86UV6 250 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 RASGEF1AQ8N9B8 481 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ACVR1CQ8NER5 493 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 FAM174AQ8TBP5 190 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 MZB1Q8WU39 189 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 SNX19Q92543 992 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 MTBPQ96DY7 904 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ATXN7L3BQ96GX2 97 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 GPR22Q99680 433 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 SH3GL2Q99962 352 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 CLPBQ9H078 707 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ACBD3Q9H3P7 528 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 ATXN10Q9UBB4 475 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 TMEM98Q9Y2Y6 226 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 PCDHB1Q9Y5F3 818 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 COMMD10Q9Y6G5 202 aa16.15■□□□□ 0.18
CDK5RAP3-228ENST00000583363 FAM95CA0A1B0GW59 222 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 MEI4A8MW99 385 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 TRIM49D1C9J1S8 452 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 H0Y8X5 98 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 RGS16O15492 202 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 SGTAO43765 313 aa16.14■□□□□ 0.17
CDK5RAP3-228ENST00000583363 VEGFDO43915 354 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms