RNA–Protein interactions for RNA: ENST00000582169.5

EIF4A1-223, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 4

Gene EIF4A1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-223	ENST00000582169	FNDC3A	Q9Y2H6	1198 aa	Known RBP	10.69	□□□□□ -0.7
EIF4A1-223	ENST00000582169		A0A1B0GVT2	93 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169		H3BM21	787 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	DYNC1I1	O14576	645 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	HAUS5	O94927	633 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	MYCLP1	P12525	358 aa	Predicted RBP	10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	TTPA	P49638	278 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	CSE1L	P55060	971 aa	Known RBP	10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	NXPH1	P58417	271 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	IRX4	P78413	519 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	MPP1	Q00013	466 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	CDK3	Q00526	305 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	PDE1C	Q14123	709 aa	Predicted RBP	10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	NFATC4	Q14934	902 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	KLHL38	Q2WGJ6	581 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	AARS2	Q5JTZ9	985 aa	Known RBP	10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	TCEAL6	Q6IPX3	200 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	ADGRD1	Q6QNK2	874 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	LAYN	Q6UX15	382 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	MACC1	Q6ZN28	852 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169		Q6ZSR6	202 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	ZC3HC1	Q86WB0	502 aa	Known RBP	10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	HEATR4	Q86WZ0	1026 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	PPM1N	Q8N819	430 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	OR2W6P	Q8NHA6	318 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	DCAKD	Q8WVC6	231 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	CDKL2	Q92772	493 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	TCEAL3	Q969E4	200 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	SCARF2	Q96GP6	870 aa	Predicted RBP	10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	HIC2	Q96JB3	615 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	BIRC8	Q96P09	236 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	CPNE1	Q99829	537 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	APOO	Q9BUR5	198 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	GTPBP2	Q9BX10	602 aa	Known RBP	10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	SMOC1	Q9H4F8	434 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	ERVMER34-1	Q9H9K5	563 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	PPCS	Q9HAB8	311 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	TRIM39	Q9HCM9	518 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	TMEM9B	Q9NQ34	198 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	PPAN	Q9NQ55	473 aa	Known RBP	10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	NSMCE4A	Q9NXX6	385 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	ZFAT	Q9P243	1243 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	SLC24A2	Q9UI40	661 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	CA5B	Q9Y2D0	317 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	MED16	Q9Y2X0	877 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	OAS3	Q9Y6K5	1087 aa	Known RBP	10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	WDR87	Q6ZQQ6	2873 aa		10.68	□□□□□ -0.7
EIF4A1-223	ENST00000582169	GPR179	Q6PRD1	2367 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	OTOGL	Q3ZCN5	2332 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	LRP4	O75096	1905 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	SPTY2D1-AS1	A0A0U1RR47	76 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	OR1I1	O60431	355 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	FAM155B	O75949	473 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	SLC25A14	O95258	325 aa	Predicted RBP	10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	FUCA1	P04066	466 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	WNT1	P04628	370 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	F7	P08709	466 aa	Predicted RBP	10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	RPS3	P23396	243 aa	Known RBP eCLIP	10.67	□□□□□ -0.7	3e-12	■■■■■ 29.2
EIF4A1-223	ENST00000582169	GP5	P40197	560 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	CTSK	P43235	329 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	CSRP3	P50461	194 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	CCT8	P50990	548 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	BLK	P51451	505 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	EIF3B	P55884	814 aa	Known RBP	10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	KIAA1024L	P59773	190 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	TIAL1	Q01085	375 aa	Known RBP eCLIP	10.67	□□□□□ -0.7	5e-8	■■■□□ 16.5
EIF4A1-223	ENST00000582169	ZNF844	Q08AG5	666 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	SF3A2	Q15428	464 aa	Known RBP	10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	KIF19	Q2TAC6	998 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	INAVA	Q3KP66	663 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	LDLRAP1	Q5SW96	308 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	TPRG1L	Q5T0D9	272 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	RNF187	Q5TA31	235 aa	Predicted RBP	10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	GRTP1	Q5TC63	336 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	ZNF549	Q6P9A3	640 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	CNST	Q6PJW8	725 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	LRIG3	Q6UXM1	1119 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	TAS2R42	Q7RTR8	314 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	STRA8	Q7Z7C7	330 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	ADGRG6	Q86SQ4	1221 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	PHYKPL	Q8IUZ5	450 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	RBFA	Q8N0V3	343 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	DCLK2	Q8N568	766 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	GABPB2	Q8TAK5	448 aa	Predicted RBP	10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	MZB1	Q8WU39	189 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	10.67	□□□□□ -0.7	9e-7	■■■□□ 17.3
EIF4A1-223	ENST00000582169	WDR92	Q96MX6	357 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	ZIM3	Q96PE6	472 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	PAFAH2	Q99487	392 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	COPS8	Q99627	209 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	RBBP8	Q99708	897 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	BOC	Q9BWV1	1114 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	ROPN1B	Q9BZX4	212 aa	Predicted RBP	10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	ZCCHC2	Q9C0B9	1178 aa	Known RBP	10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	RHOJ	Q9H4E5	214 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	VIPAS39	Q9H9C1	493 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	ROPN1	Q9HAT0	212 aa	Predicted RBP	10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	PARD6A	Q9NPB6	346 aa		10.67	□□□□□ -0.7
EIF4A1-223	ENST00000582169	CRLS1	Q9UJA2	301 aa		10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms