RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	TLN1	Q9Y490	2541 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	SPTA1	P02549	2419 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	MN1	Q10571	1320 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	PPP1R12A	O14974	1030 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	KMO	O15229	486 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CAPN5	O15484	640 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	GPR39	O43194	453 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	KIF1C	O43896	1103 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	RASSF9	O75901	435 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	UBXN7	O94888	489 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CDK14	O94921	469 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	BRAF	P15056	766 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ZNF28	P17035	718 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ZNF7	P17097	686 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	F8A1	P23610	371 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	PTPN3	P26045	913 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	DCDC1	P59894	354 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	KAZN	Q674X7	775 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	MFSD7	Q6UXD7	560 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	FAM92B	Q6ZTR7	304 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TMEM26	Q6ZUK4	368 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TRAPPC5	Q8IUR0	188 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ZNF547	Q8IVP9	402 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	SLC25A41	Q8N5S1	370 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	OR8K1	Q8NGG5	319 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	GDAP1	Q8TB36	358 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	RSC1A1	Q92681	617 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	C9orf72	Q96LT7	481 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	OLFM3	Q96PB7	478 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ADNP	Q9H2P0	1102 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	GLOD4	Q9HC38	313 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	MAGEE1	Q9HCI5	957 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	SIDT1	Q9NXL6	827 aa	Known RBP	11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	LCMT1	Q9UIC8	334 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TMPRSS11E	Q9UL52	423 aa		11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.45	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114		A0A0A6YYK5	440 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CHUK	O15111	745 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	BUD23	O43709	281 aa	Known RBP	11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	NDST3	O95803	873 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	DLGAP3	O95886	979 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	XRCC1	P18887	633 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	STAT5A	P42229	794 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CLCNKA	P51800	687 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	PPP1CA	P62136	330 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ABHD18	Q0P651	414 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	GPR18	Q14330	331 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ATP13A5	Q4VNC0	1218 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TEX44	Q53QW1	395 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CCDC70	Q6NSX1	233 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	IRGC	Q6NXR0	463 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	RASGRP3	Q8IV61	690 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	AVL9	Q8NBF6	648 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	GALNT6	Q8NCL4	622 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TADA1	Q96BN2	335 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	HAUS1	Q96CS2	278 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CXorf40B	Q96DE9	158 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CATSPER2	Q96P56	530 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	OR6C1	Q96RD1	312 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	DNAJC7	Q99615	494 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ZPBP	Q9BS86	351 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TIMM29	Q9BSF4	260 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	EPN3	Q9H201	632 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	EPB41L1	Q9H4G0	881 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	RAD18	Q9NS91	495 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ABHD10	Q9NUJ1	306 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	WDR37	Q9Y2I8	494 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	RPS6KL1	Q9Y6S9	549 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ZNF106	Q9H2Y7	1883 aa	Known RBP	11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	COL12A1	Q99715	3063 aa		11.44	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	SSU72P8	A0A1W2PR75	194 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ZNF487	B1APH4	448 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	SPOP	O43791	374 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	UGT1A9	O60656	530 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	KATNA1	O75449	491 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	KIAA0754	O94854	1291 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	C9	P02748	559 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TPM3	P06753	285 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ANKRD34C	P0C6C1	535 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	PECAM1	P16284	738 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ZFX	P17010	805 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	UGT1A6	P19224	532 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	NFKB1	P19838	968 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TCN2	P20062	427 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	NR1D1	P20393	614 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	COMT	P21964	271 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	UGT1A1	P22309	533 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	UGT1A4	P22310	534 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	PBLD	P30039	288 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CD68	P34810	354 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CA5A	P35218	305 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	DLST	P36957	453 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	ARHGAP25	P42331	645 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CHRNA4	P43681	627 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	WNT3A	P56704	352 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	TMEM115	Q12893	351 aa	Predicted RBP	11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	GTF2H3	Q13889	308 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	IGFBP7	Q16270	282 aa		11.43	□□□□□ -0.58
CDK5RAP3-223	ENST00000582114	CACHD1	Q5VU97	1274 aa		11.43	□□□□□ -0.58

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