RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 IL11RAQ14626 422 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 PDK1Q15118 436 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 SLC14A2Q15849 920 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 SLC18A3Q16572 532 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 ZNF648Q5T619 568 aaPredicted RBP10.44□□□□□ -0.74
RFFL-209ENST00000581265 AGAP9Q5VTM2 703 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 SLC9A4Q6AI14 798 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 NT5DC3Q86UY8 548 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 LUZP1Q86V48 1076 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 ZNF547Q8IVP9 402 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 CTNNBL1Q8WYA6 563 aaPredicted RBP10.44□□□□□ -0.74
RFFL-209ENST00000581265 STARD8Q92502 1023 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 ABHD17AQ96GS6 310 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 SRPK1Q96SB4 655 aaKnown RBP10.44□□□□□ -0.74
RFFL-209ENST00000581265 TIMM29Q9BSF4 260 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 XPO4Q9C0E2 1151 aaKnown RBP10.44□□□□□ -0.74
RFFL-209ENST00000581265 BRD8Q9H0E9 1235 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 SLC25A51Q9H1U9 297 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 OSGEPL1Q9H4B0 414 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 SLC40A1Q9NP59 571 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 ARFGAP3Q9NP61 516 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 SHOC2Q9UQ13 582 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 HEY1Q9Y5J3 304 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 RPS6KL1Q9Y6S9 549 aa10.44□□□□□ -0.74
RFFL-209ENST00000581265 NOTCH2Q04721 2471 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 SPTAN1Q13813 2472 aaKnown RBP10.43□□□□□ -0.74
RFFL-209ENST00000581265 LRRD1A4D1F6 860 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 GOLGA6L3A6NEY3 463 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 C3orf70A6NLC5 250 aaPredicted RBP10.43□□□□□ -0.74
RFFL-209ENST00000581265 MTA2O94776 668 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 CDK14O94921 469 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 PIRTP0C851 137 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 BRAFP15056 766 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 ZNF28P17035 718 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 BPIP17213 487 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 TYRP1P17643 537 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 AMD1P17707 334 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 F8A1P23610 371 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 CASP14P31944 242 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 CDK18Q07002 472 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 FOXM1Q08050 763 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 AP1B1Q10567 949 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 SEPT6Q14141 434 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 INSCQ1MX18 579 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 ASTE1Q2TB18 679 aaPredicted RBP10.43□□□□□ -0.74
RFFL-209ENST00000581265 DEFB109BQ30KR1 87 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 ZFYVE27Q5T4F4 411 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 ALS2CLQ60I27 953 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 C6orf15Q6UXA7 325 aaPredicted RBP10.43□□□□□ -0.74
RFFL-209ENST00000581265 LRRTM4Q86VH4 590 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 TRIM48Q8IWZ4 208 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 RBM12BQ8IXT5 1001 aaKnown RBP10.43□□□□□ -0.74
RFFL-209ENST00000581265 DTX3LQ8TDB6 740 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 KLHL6Q8WZ60 621 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 AGAP3Q96P47 875 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 OLFM3Q96PB7 478 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 VPS35Q96QK1 796 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 PACSIN1Q9BY11 444 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 GPR63Q9BZJ6 419 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 ULBP3Q9BZM4 244 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 RAB33BQ9H082 229 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 ZNF768Q9H5H4 540 aaKnown RBP10.43□□□□□ -0.74
RFFL-209ENST00000581265 ZNF71Q9NQZ8 489 aaPredicted RBP10.43□□□□□ -0.74
RFFL-209ENST00000581265 POT1Q9NUX5 634 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 EPHA6Q9UF33 1036 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 TMPRSS11EQ9UL52 423 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 PLAAQ9Y263 795 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 ZNF711Q9Y462 761 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 PCDHB3Q9Y5E6 796 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 KCNMB2Q9Y691 235 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 COL12A1Q99715 3063 aa10.43□□□□□ -0.74
RFFL-209ENST00000581265 RP1L1Q8IWN7 2480 aaPredicted RBP10.43□□□□□ -0.74
RFFL-209ENST00000581265 PDZK1P1A8MUH7 402 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 APOL1O14791 398 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 KCNJ13O60928 360 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 NDST3O95803 873 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 RECKO95980 971 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 TMEM253P0C7T8 217 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 FGF5P12034 268 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 ZFXP17010 805 aaPredicted RBP10.42□□□□□ -0.74
RFFL-209ENST00000581265 IDSP22304 550 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 DLSTP36957 453 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 ARHGAP25P42331 645 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 LEPRP48357 1165 aaKnown RBP10.42□□□□□ -0.74
RFFL-209ENST00000581265 SEPHS1P49903 392 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 SH3BP2P78314 561 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 TMEM115Q12893 351 aaPredicted RBP10.42□□□□□ -0.74
RFFL-209ENST00000581265 MESDQ14696 234 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 KHDC1Q4VXA5 237 aaKnown RBP10.42□□□□□ -0.74
RFFL-209ENST00000581265 TEX44Q53QW1 395 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 LRRC38Q5VT99 294 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 CCDC70Q6NSX1 233 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 C16orf46Q6P387 395 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 CRTC3Q6UUV7 619 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 PRSS42Q7Z5A4 293 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 C11orf96Q7Z7L8 435 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 SLC35G2Q8TBE7 412 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.42□□□□□ -0.74
RFFL-209ENST00000581265 ZDHHC12Q96GR4 267 aa10.42□□□□□ -0.74
RFFL-209ENST00000581265 TGM7Q96PF1 710 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms