RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 NAB2Q15742 525 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 GPATCH4Q5T3I0 446 aaKnown RBP4.36□□□□□ -1.71
NF1-220ENST00000581113 GKAP1Q5VSY0 366 aaPredicted RBP4.36□□□□□ -1.71
NF1-220ENST00000581113 SEPT14Q6ZU15 432 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 SFR1Q86XK3 245 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 HSCBQ8IWL3 235 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 ZNF34Q8IZ26 560 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 DCP1BQ8IZD4 617 aaKnown RBP4.36□□□□□ -1.71
NF1-220ENST00000581113 OR8H2Q8N162 312 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 CHCHD4Q8N4Q1 142 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 SRBD1Q8N5C6 995 aaKnown RBP4.36□□□□□ -1.71
NF1-220ENST00000581113 ZNF441Q8N8Z8 693 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 HMGCLL1Q8TB92 370 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 SGCDQ92629 289 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 USP6NLQ92738 828 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 APBB2Q92870 758 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 LMLNQ96KR4 655 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 C1orf74Q96LT6 269 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 IL17FQ96PD4 163 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 MYCBPQ99417 103 aaPredicted RBP4.36□□□□□ -1.71
NF1-220ENST00000581113 MTERF1Q99551 399 aaKnown RBP4.36□□□□□ -1.71
NF1-220ENST00000581113 SH2D4AQ9H788 454 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 PCDH9Q9HC56 1237 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 EIF2B3Q9NR50 452 aaKnown RBP4.36□□□□□ -1.71
NF1-220ENST00000581113 ITIH6Q6UXX5 1313 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 HCRTR2O43614 444 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 RPN1P04843 607 aaKnown RBP4.35□□□□□ -1.71
NF1-220ENST00000581113 SNRNP70P08621 437 aaKnown RBP4.35□□□□□ -1.71
NF1-220ENST00000581113 CDH2P19022 906 aaPredicted RBP4.35□□□□□ -1.71
NF1-220ENST00000581113 UBA1P22314 1058 aaKnown RBP4.35□□□□□ -1.71
NF1-220ENST00000581113 MAPK4P31152 587 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 RXRGP48443 463 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 GALCP54803 685 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 ARF3P61204 181 aaPredicted RBP4.35□□□□□ -1.71
NF1-220ENST00000581113 ARF1P84077 181 aaKnown RBP4.35□□□□□ -1.71
NF1-220ENST00000581113 PDE1BQ01064 536 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 GRIK2Q13002 908 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 CDC16Q13042 620 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 CDC37Q16543 378 aaPredicted RBP4.35□□□□□ -1.71
NF1-220ENST00000581113 ZSCAN23Q3MJ62 389 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 DCST1Q5T197 706 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 FRG2Q64ET8 278 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 KLHL35Q6PF15 583 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 GLDNQ6ZMI3 551 aaPredicted RBP4.35□□□□□ -1.71
NF1-220ENST00000581113 BHLHA9Q7RTU4 235 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 ANKRD23Q86SG2 305 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 SNX32Q86XE0 403 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 BEST3Q8N1M1 668 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 SPATA20Q8TB22 786 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 POMGNT1Q8WZA1 660 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 FIG4Q92562 907 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 FTOQ9C0B1 505 aaKnown RBP eCLIP4.35□□□□□ -1.71
NF1-220ENST00000581113 PDZD7Q9H5P4 517 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 KAT14Q9H8E8 782 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 PLSCR4Q9NRQ2 329 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 MRGBPQ9NV56 204 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 SEPT11Q9NVA2 429 aaKnown RBP4.35□□□□□ -1.71
NF1-220ENST00000581113 HCFC1R1Q9NWW0 138 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 CWC15Q9P013 229 aaKnown RBP4.35□□□□□ -1.71
NF1-220ENST00000581113 OR14J1Q9UGF5 321 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 AMDHD2Q9Y303 409 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 PCDHAC2Q9Y5I4 1007 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 FAM135BQ49AJ0 1406 aa4.35□□□□□ -1.71
NF1-220ENST00000581113 RRBP1Q9P2E9 1410 aaKnown RBP4.35□□□□□ -1.71
NF1-220ENST00000581113 PDS5AQ29RF7 1337 aaKnown RBP4.34□□□□□ -1.71
NF1-220ENST00000581113 NKTRP30414 1462 aaKnown RBP4.34□□□□□ -1.71
NF1-220ENST00000581113 TMEM131LA2VDJ0 1609 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 IQGAP3Q86VI3 1631 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 MYO1GB0I1T2 1018 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 M0QZ24 198 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 ATP2A1O14983 1001 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 GLULP15104 373 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 S1PR1P21453 382 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 CORO1AP31146 461 aaKnown RBP4.34□□□□□ -1.71
NF1-220ENST00000581113 PRCPP42785 496 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 RPL36AP83881 106 aaKnown RBP4.34□□□□□ -1.71
NF1-220ENST00000581113 SLC20A2Q08357 652 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 ZBTB17Q13105 803 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 MAD2L1Q13257 205 aaPredicted RBP4.34□□□□□ -1.71
NF1-220ENST00000581113 PNLIPRP3Q17RR3 467 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 KLHL22Q53GT1 634 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 LRIF1Q5T3J3 769 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 TMEM154Q6P9G4 183 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 UNQ6126/PRO20091Q6UXV3 157 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 SATL1Q86VE3 508 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 SCFD2Q8WU76 684 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 SLC20A1Q8WUM9 679 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 SECTM1Q8WVN6 248 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 RHBDF1Q96CC6 855 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 CMTM3Q96MX0 182 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 CHCHD6Q9BRQ6 235 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 PIGMQ9H3S5 423 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 LRRC4Q9HBW1 653 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 LTB4R2Q9NPC1 389 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 COPG2Q9UBF2 871 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 PADI1Q9ULC6 663 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 MTMR6Q9Y217 621 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 KLHL20Q9Y2M5 609 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 LYVE1Q9Y5Y7 322 aa4.34□□□□□ -1.71
NF1-220ENST00000581113 CLIC4Q9Y696 253 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms