RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 UBE2Q2Q8WVN8 375 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 ZFPM2Q8WW38 1151 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 HTR3CQ8WXA8 447 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 ART4Q93070 314 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 CATSPER2Q96P56 530 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 QKIQ96PU8 341 aaKnown RBP eCLIP14.29□□□□□ -0.122e-13■■■■■ 29.8
SMARCE1-216ENST00000580419 PANX2Q96RD6 677 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 FERMT1Q9BQL6 677 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 SUDS3Q9H7L9 328 aaPredicted RBP14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 STARD5Q9NSY2 213 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 SLC39A1Q9NY26 324 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 IL17CQ9P0M4 197 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 TUBD1Q9UJT1 453 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 SHOC2Q9UQ13 582 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 B3GALT1Q9Y5Z6 326 aa14.29□□□□□ -0.12
SMARCE1-216ENST00000580419 GOLGA6L3A6NEY3 463 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 CDK14O94921 469 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 PYGMP11217 842 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 CYLC1P35663 651 aaPredicted RBP14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 WNT3AP56704 352 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 ITGA9Q13797 1035 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 SPA17Q15506 151 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 SLC1A5Q15758 541 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 LINC00303Q3SY05 128 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 LDLRAP1Q5SW96 308 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 C11orf96Q7Z7L8 435 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 ZNF547Q8IVP9 402 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 TTC30BQ8N4P2 665 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 DDHD1Q8NEL9 900 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 LRRN4Q8WUT4 740 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 RTP4Q96DX8 246 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 SLC45A3Q96JT2 553 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 SLC12A9Q9BXP2 914 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 IL26Q9NPH9 171 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 KLC4Q9NSK0 619 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 KCNK6Q9Y257 313 aa14.28□□□□□ -0.12
SMARCE1-216ENST00000580419 J3QKU1 62 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 PMPCBO75439 489 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 ANXA9O76027 345 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 RECKO95980 971 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 PECAM1P16284 738 aaPredicted RBP14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 IDSP22304 550 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 CTNNA1P35221 906 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 NOP2P46087 812 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 DYNLT1P63172 113 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 ABHD18Q0P651 414 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 TMEM115Q12893 351 aaPredicted RBP14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 IL11RAQ14626 422 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 ATP13A5Q4VNC0 1218 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 SIRPB2Q5JXA9 342 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 KIAA1614Q5VZ46 1190 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 KLHDC8BQ8IXV7 354 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 ZNF567Q8N184 647 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 NCSTNQ92542 709 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 MRGPRX2Q96LB1 330 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 C9orf72Q96LT7 481 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 FCRL4Q96PJ5 515 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 CEP41Q9BYV8 373 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 FAM117AQ9C073 453 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 SEMA4CQ9C0C4 833 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 SLC40A1Q9NP59 571 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 PRDM8Q9NQV8 689 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 GEMIN8Q9NWZ8 242 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 OCIAD1Q9NX40 245 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 SIDT1Q9NXL6 827 aaKnown RBP14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 TMEM9Q9P0T7 183 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 FEZ2Q9UHY8 353 aaPredicted RBP14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 TMPRSS11EQ9UL52 423 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 PRKAB1Q9Y478 270 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 PCDHA3Q9Y5H8 950 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 PCDHA13Q9Y5I0 950 aa14.27□□□□□ -0.13
SMARCE1-216ENST00000580419 CCDC66A2RUB6 948 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 C5orf60A6NFR6 353 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 EFCAB7A8K855 629 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 AGAP14A8MT82 685 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 UBXN7O94888 489 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 VIPP01282 170 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 NFKB1P19838 968 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 SPAM1P38567 509 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 SLC19A1P41440 591 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 PDE1BQ01064 536 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 NFATC2Q13469 925 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 LY6DQ14210 128 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 NOMO1Q15155 1222 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 PCSK7Q16549 785 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 INSCQ1MX18 579 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 ITPRIPL1Q6GPH6 555 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 RANBP10Q6VN20 620 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 PID1Q7Z2X4 250 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 PRSS42Q7Z5A4 293 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 BPHLQ86WA6 291 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 TMTC1Q8IUR5 882 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 CACNA2D3Q8IZS8 1091 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 NLGN4XQ8N0W4 816 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 CARFQ8N187 725 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 IL22RA1Q8N6P7 574 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 BEND7Q8N7W2 519 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 EXD3Q8N9H8 876 aa14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 NLGN4YQ8NFZ3 816 aaPredicted RBP14.26□□□□□ -0.13
SMARCE1-216ENST00000580419 OXNAD1Q96HP4 312 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms