RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 CASS4Q9NQ75 786 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 HOMER3Q9NSC5 361 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 SMOXQ9NWM0 555 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 ZMIZ1Q9ULJ6 1067 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 TTC7AQ9ULT0 858 aaPredicted RBP18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 SNX12Q9UMY4 172 aa18.4■□□□□ 0.54
PPP4R1-215ENST00000580182 OR2AG2A6NM03 316 aa18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 PNLIPP16233 465 aa18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 MC4RP32245 332 aa18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 HADHAP40939 763 aa18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 TERF1P54274 439 aa18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 BASP1P80723 227 aaKnown RBP18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 IYDQ6PHW0 289 aa18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 TMEM220Q6QAJ8 160 aa18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 DET1Q7L5Y6 550 aa18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 ZNF438Q7Z4V0 828 aa18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 B3GNT8Q7Z7M8 397 aa18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 ZNF761Q86XN6 746 aaPredicted RBP18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 SFRP1Q8N474 314 aa18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 MAGOHBQ96A72 148 aaKnown RBP18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 ATXN7L3BQ96GX2 97 aa18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 GFM1Q96RP9 751 aaKnown RBP18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 NLE1Q9NVX2 485 aaPredicted RBP18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 SCHIP1Q9P0W5 487 aaPredicted RBP18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 CRLS1Q9UJA2 301 aa18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 ENTPD2Q9Y5L3 495 aa18.39■□□□□ 0.53
PPP4R1-215ENST00000580182 IGF2RP11717 2491 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 TMEM8BA6NDV4 472 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 MROH6A6NGR9 719 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 PRR19A6NJB7 356 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 AGAP14A8MT82 685 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 PGRMC1O00264 195 aaKnown RBP18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 TCEA3O75764 348 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 MSH3P20585 1137 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 MSNP26038 577 aaKnown RBP18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 ALDH4A1P30038 563 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 AKT1P31749 480 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 ARSDP51689 593 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 CLCNKAP51800 687 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 BIRC2Q13490 618 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 SEPT7Q16181 437 aaKnown RBP18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 AMZ1Q400G9 498 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 ZRANB3Q5FWF4 1079 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 TMPRSS9Q7Z410 1059 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 SNX20Q7Z614 316 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 BEND7Q8N7W2 519 aaPredicted RBP18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 WDR48Q8TAF3 677 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 ACTRT1Q8TDG2 376 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 STYXQ8WUJ0 223 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 SGF29Q96ES7 293 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 CDKN2AIPNLQ96HQ2 116 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 C19orf43Q9BQ61 176 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 TIMM29Q9BSF4 260 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 FOXP3Q9BZS1 431 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 NRSN2Q9GZP1 204 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 AK5Q9Y6K8 562 aa18.38■□□□□ 0.53
PPP4R1-215ENST00000580182 A0A1W2PNU3 283 aaPredicted RBP18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 TCRBV7S3A2A0A539 114 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 PMS2P1A4D2B8 440 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 OR51F1A6NGY5 319 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 D6RAR5 112 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 H7C0S8 307 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 POP7O75817 140 aaKnown RBP18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 MPOP05164 745 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 F3P13726 295 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 ITGALP20701 1170 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 COILP38432 576 aaPredicted RBP18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 VPS41P49754 854 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 GNG11P61952 73 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 NR1D2Q14995 579 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 RTP5Q14D33 572 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 CYP1B1Q16678 543 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 NXPE2Q96DL1 559 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 ZNF778Q96MU6 729 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 ZCCHC2Q9C0B9 1178 aaKnown RBP18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 RDH14Q9HBH5 336 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 SLC2A6Q9UGQ3 507 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 SLC30A1Q9Y6M5 507 aa18.37■□□□□ 0.53
PPP4R1-215ENST00000580182 SGTAO43765 313 aa18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 KRT14P02533 472 aa18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 BRAFP15056 766 aa18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 PSMA3P25788 255 aa18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 RPL10P27635 214 aaKnown RBP18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 PBLDP30039 288 aaPredicted RBP18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 FASLGP48023 281 aa18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 DRG2P55039 364 aaKnown RBP18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 CCDC173Q0VFZ6 552 aa18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 FNBP1LQ5T0N5 605 aa18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 NKAIN2Q5VXU1 208 aa18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 CCDC137Q6PK04 289 aaKnown RBP18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 C4orf22Q6V702 233 aa18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 FAM83HQ6ZRV2 1179 aaPredicted RBP18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 USP53Q70EK8 1073 aa18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 NXPE1Q8N323 547 aa18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 OR13J1Q8NGT2 312 aa18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 EIF2B3Q9NR50 452 aaKnown RBP18.36■□□□□ 0.53
PPP4R1-215ENST00000580182 TRBV5-4A0A0C4DH59 114 aa18.35■□□□□ 0.53
PPP4R1-215ENST00000580182 PRAMEF33A0A0G2JMD5 474 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms