RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ZNF350Q9GZX5 532 aa3.14□□□□□ -1.91
KPNB1-208ENST00000580019 CDCP1Q9H5V8 836 aa3.14□□□□□ -1.91
KPNB1-208ENST00000580019 SFXN1Q9H9B4 322 aa3.14□□□□□ -1.91
KPNB1-208ENST00000580019 IARS2Q9NSE4 1012 aaKnown RBP3.14□□□□□ -1.91
KPNB1-208ENST00000580019 OLAHQ9NV23 265 aa3.14□□□□□ -1.91
KPNB1-208ENST00000580019 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.14□□□□□ -1.91
KPNB1-208ENST00000580019 ERAP1Q9NZ08 941 aa3.14□□□□□ -1.91
KPNB1-208ENST00000580019 ABI3Q9P2A4 366 aa3.14□□□□□ -1.91
KPNB1-208ENST00000580019 CTTNBP2NLQ9P2B4 639 aa3.14□□□□□ -1.91
KPNB1-208ENST00000580019 FBXW2Q9UKT8 454 aa3.14□□□□□ -1.91
KPNB1-208ENST00000580019 CCPG1Q9ULG6 757 aa3.14□□□□□ -1.91
KPNB1-208ENST00000580019 DHDHQ9UQ10 334 aa3.14□□□□□ -1.91
KPNB1-208ENST00000580019 CLCA3PQ9Y6N3 262 aa3.14□□□□□ -1.91
KPNB1-208ENST00000580019 MLH3Q9UHC1 1453 aa3.14□□□□□ -1.91
KPNB1-208ENST00000580019 NOTCH3Q9UM47 2321 aa3.14□□□□□ -1.91
KPNB1-208ENST00000580019 CAMTA1Q9Y6Y1 1673 aa3.14□□□□□ -1.91
KPNB1-208ENST00000580019 MSH6P52701 1360 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 NINLQ9Y2I6 1382 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 UGGT1Q9NYU2 1555 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 SMIM30A4D0T7 59 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 CTAGE9A4FU28 777 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 C2orf81A6NN90 581 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 TTC34A8MYJ7 566 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 FAM25EA8MYX2 175 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 EIF3DO15371 548 aaKnown RBP eCLIP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 SEC14L5O43304 696 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 SPRY1O43609 319 aaPredicted RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 USP12O75317 370 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 AKAP3O75969 853 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 GAS8-AS1O95177 125 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 SERPINC1P01008 464 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 HLA-DQA2P01906 255 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 TFP02787 698 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 HIST1H2ABP04908 130 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 HEXAP06865 529 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 TOP1P11387 765 aaKnown RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 KRT5P13647 590 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 MMP9P14780 707 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 ETS1P14921 441 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 CREB1P16220 341 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 GJA1P17302 382 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 ITIH1P19827 911 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 HIST1H2ADP20671 130 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 DRD4P21917 467 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 MYF6P23409 242 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 ADRA1DP25100 572 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 PCGF2P35227 344 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 SOX10P56693 466 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 RPS7P62081 194 aaKnown RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 TXNL4AP83876 142 aaKnown RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 PRKCEQ02156 737 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 FPGSQ05932 587 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 CXCL9Q07325 125 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 IFT88Q13099 833 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 SGCGQ13326 291 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 DYRK1AQ13627 763 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 GAMTQ14353 236 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 PTPRCAPQ14761 206 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 DRAP1Q14919 205 aaPredicted RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 PGM5Q15124 567 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 GEN1Q17RS7 908 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 ZNF789Q5FWF6 425 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 SHEQ5VZ18 495 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 CES4AQ5XG92 561 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 FAM91A1Q658Y4 838 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 DENND2CQ68D51 928 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 PLA2G4FQ68DD2 849 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 DHRS7BQ6IAN0 325 aaPredicted RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 PSRC1Q6PGN9 363 aaPredicted RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 GSG1LQ6UXU4 331 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 MEX3BQ6ZN04 569 aaKnown RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 CLEC17AQ6ZS10 378 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 HIST3H2AQ7L7L0 130 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 TMPRSS9Q7Z410 1059 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 CENPVQ7Z7K6 275 aaPredicted RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 AACSQ86V21 672 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 CAND1Q86VP6 1230 aaKnown RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 ARID3BQ8IVW6 561 aaPredicted RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 FBXW8Q8N3Y1 598 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 RNF169Q8NCN4 708 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 OR10S1Q8NGN2 331 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 CFAP61Q8NHU2 1237 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 URGCPQ8TCY9 931 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 TMEM255BQ8WV15 326 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 ATG4AQ8WYN0 398 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 SNX19Q92543 992 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 DNASE1L2Q92874 299 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 C5orf30Q96GV9 206 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 FBXL20Q96IG2 436 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 RMDN2Q96LZ7 410 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 CEP295NLQ96MC4 621 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 ZNF830Q96NB3 372 aaPredicted RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 ZNF558Q96NG5 402 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 INPP5KQ9BT40 448 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 GLIS2Q9BZE0 524 aaPredicted RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 GOLPH3LQ9H4A5 285 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 NCOR1P1Q9H4R4 102 aa3.13□□□□□ -1.91
KPNB1-208ENST00000580019 NOL11Q9H8H0 719 aaKnown RBP3.13□□□□□ -1.91
KPNB1-208ENST00000580019 GLOD4Q9HC38 313 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms