RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 ADCY2Q08462 1091 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 DNAJC3Q13217 504 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 EIF3IQ13347 325 aaKnown RBP6.99□□□□□ -1.29
CASC3-205ENST00000577605 ITGA9Q13797 1035 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 RTP5Q14D33 572 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 RPS6KA1Q15418 735 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 SLC1A5Q15758 541 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 ST3GAL2Q16842 350 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 PARP6Q2NL67 630 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 ZNF569Q5MCW4 686 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 ANKRD20A2Q5SQ80 823 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 TPRG1LQ5T0D9 272 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 HENMT1Q5T8I9 393 aaKnown RBP6.99□□□□□ -1.29
CASC3-205ENST00000577605 SEL1L2Q5TEA6 688 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 HES3Q5TGS1 186 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 ANKRD20A1Q5TYW2 823 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 ANKRD20A3Q5VUR7 823 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 CDCP2Q5VXM1 449 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 KDELC1Q6UW63 502 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 TSPAN33Q86UF1 283 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 THNSL2Q86YJ6 484 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 GALNT13Q8IUC8 556 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 RBFAQ8N0V3 343 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 FAM46DQ8NEK8 389 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 GPR156Q8NFN8 814 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 HEXDCQ8WVB3 486 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 OR1E3Q8WZA6 343 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 ALG3Q92685 438 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 SH3KBP1Q96B97 665 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 SPATA13Q96N96 652 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 VPS35Q96QK1 796 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 OR2M4Q96R27 311 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 RIOK2Q9BVS4 552 aaKnown RBP6.99□□□□□ -1.29
CASC3-205ENST00000577605 LGR4Q9BXB1 951 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 CLPBQ9H078 707 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 CARD9Q9H257 536 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 GOLPH3Q9H4A6 298 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 CARS2Q9HA77 564 aaKnown RBP6.99□□□□□ -1.29
CASC3-205ENST00000577605 ARNT2Q9HBZ2 717 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 TRIM39Q9HCM9 518 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 FGF22Q9HCT0 170 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 MOSPD1Q9UJG1 213 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 GUCA1BQ9UMX6 200 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 TFR2Q9UP52 801 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 PKP3Q9Y446 797 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 ZNF711Q9Y462 761 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 VPS13AQ96RL7 3174 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 SPAG17Q6Q759 2223 aa6.99□□□□□ -1.29
CASC3-205ENST00000577605 NYNRINQ9P2P1 1898 aaKnown RBP6.98□□□□□ -1.29
CASC3-205ENST00000577605 CEP192Q8TEP8 1941 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 RIF1Q5UIP0 2472 aaKnown RBP6.98□□□□□ -1.29
CASC3-205ENST00000577605 CPED1A4D0V7 1026 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 TRABD2BA6NFA1 517 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 DDX3YO15523 660 aaKnown RBP6.98□□□□□ -1.29
CASC3-205ENST00000577605 KCNN4O15554 427 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 ZSCAN12O43309 604 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 NUAK1O60285 661 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 SLC25A14O95258 325 aaPredicted RBP6.98□□□□□ -1.29
CASC3-205ENST00000577605 GAS8O95995 478 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 MT-CYBP00156 380 aaPredicted RBP6.98□□□□□ -1.29
CASC3-205ENST00000577605 SOD1P00441 154 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 HOXB4P17483 251 aaPredicted RBP6.98□□□□□ -1.29
CASC3-205ENST00000577605 VCLP18206 1134 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 CD68P34810 354 aaPredicted RBP6.98□□□□□ -1.29
CASC3-205ENST00000577605 HADHAP40939 763 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 TARDBPQ13148 414 aaKnown RBP eCLIP6.98□□□□□ -1.29
CASC3-205ENST00000577605 KLF1Q13351 362 aaPredicted RBP6.98□□□□□ -1.29
CASC3-205ENST00000577605 C1orf61Q13536 156 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 SEPT6Q14141 434 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 GALNT3Q14435 633 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 HLTFQ14527 1009 aaKnown RBP eCLIP6.98□□□□□ -1.29
CASC3-205ENST00000577605 IHHQ14623 411 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 TAF1AQ15573 450 aaPredicted RBP6.98□□□□□ -1.29
CASC3-205ENST00000577605 PCSK7Q16549 785 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 C14orf28Q4W4Y0 310 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 PYCR3Q53H96 274 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 CCDC157Q569K6 752 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 LDLRAP1Q5SW96 308 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 DRICH1Q6PGQ1 229 aaPredicted RBP6.98□□□□□ -1.29
CASC3-205ENST00000577605 IGF2-ASQ6U949 168 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 RANBP10Q6VN20 620 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 RBM44Q6ZP01 1051 aaKnown RBP6.98□□□□□ -1.29
CASC3-205ENST00000577605 ARHGEF18Q6ZSZ5 1173 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 EFL1Q7Z2Z2 1120 aaKnown RBP6.98□□□□□ -1.29
CASC3-205ENST00000577605 LINC00523Q86TU6 105 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 C17orf82Q86X59 251 aaPredicted RBP6.98□□□□□ -1.29
CASC3-205ENST00000577605 PHYKPLQ8IUZ5 450 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 KLHDC8BQ8IXV7 354 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 SLC35F3Q8IY50 421 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.98□□□□□ -1.29
CASC3-205ENST00000577605 SPATA22Q8NHS9 363 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 SLC35B2Q8TB61 432 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 SCAMP4Q969E2 229 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 ZNF669Q96BR6 464 aaPredicted RBP6.98□□□□□ -1.29
CASC3-205ENST00000577605 RTP4Q96DX8 246 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 MFSD3Q96ES6 412 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 PDXPQ96GD0 296 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 ZNF514Q96K75 400 aaPredicted RBP6.98□□□□□ -1.29
CASC3-205ENST00000577605 DESI2Q9BSY9 194 aa6.98□□□□□ -1.29
CASC3-205ENST00000577605 SPATA16Q9BXB7 569 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms