RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TUBGCP3Q96CW5 907 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 DNAJC1Q96KC8 554 aaKnown RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 PPP1R2P1Q96PQ5 205 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 VCX3AQ9NNX9 186 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SARS2Q9NP81 518 aaKnown RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 TRMT13Q9NUP7 481 aaKnown RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 OSER1Q9NX31 292 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 MARCH2Q9P0N8 246 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 GMPR2Q9P2T1 348 aaKnown RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 PLXNA1Q9UIW2 1896 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 LRRC14BA6NHZ5 514 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SUPT3HB4E1H0 165 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SUPT3HO75486 399 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 RHOBTB1O94844 696 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 TIAF1O95411 115 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 CRTAMO95727 393 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 GLP2RO95838 553 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SNRPB2P08579 225 aaKnown RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 GLULP15104 373 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 ACVRL1P37023 503 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SLC7A2P52569 658 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 HK2P52789 917 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 ZNF33AQ06730 810 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 TESK1Q15569 626 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 FAM171A1Q5VUB5 890 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 KRT80Q6KB66 452 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SCIMPQ6UWF3 145 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SERINC5Q86VE9 423 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 LCA5Q86VQ0 697 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 MON1AQ86VX9 555 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 ABI1Q8IZP0 508 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 GALNT15Q8N3T1 639 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 EFHBQ8N7U6 833 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 CATSPER1Q8NEC5 780 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 TRPV1Q8NER1 839 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 OR13C4Q8NGS5 318 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SPPL2BQ8TCT7 592 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 TRPC4APQ8TEL6 797 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 DIS3LQ8TF46 1054 aaKnown RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 FAR2Q96K12 515 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 TNFRSF12AQ9NP84 129 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 TREX1Q9NSU2 369 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.33□□□□□ -1.56
VAPA-203ENST00000577539 CROTQ9UKG9 612 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 BTRCQ9Y297 605 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 AP4S1Q9Y587 144 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 PTGDR2Q9Y5Y4 395 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 ARL5AQ9Y689 179 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 ANKRD12Q6UB98 2062 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 ZNF638Q14966 1978 aaKnown RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 ELOA3CA0A087WX78 387 aaPredicted RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 BLACEA4D250 179 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 ELOA3DA6NLF2 546 aaPredicted RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 ZNF839A8K0R7 811 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 TARM1B6A8C7 271 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 NRG2O14511 850 aaPredicted RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 CLGNO14967 610 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 TSPAN3O60637 253 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 KPNA6O60684 536 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 ADRA1AP35348 466 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 CDKN2DP55273 166 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 FKBP1BP68106 108 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 XIAPP98170 497 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 GK3PQ14409 553 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SQLEQ14534 574 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 LPIN1Q14693 890 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 KCNA10Q16322 511 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 ELOA3BQ3SY89 546 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SIRPB2Q5JXA9 342 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 KIAA1614Q5VZ46 1190 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 CWF19L1Q69YN2 538 aaKnown RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 REP15Q6BDI9 236 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 MRNIPQ6NTE8 343 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 FBXL22Q6P050 247 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 KIAA0408Q6ZU52 694 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 NECAB2Q7Z6G3 386 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SLC22A9Q8IVM8 553 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 LILRA2Q8N149 483 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 ELOA3Q8NG57 546 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SOCS4Q8WXH5 440 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 LRTOMTQ8WZ04 291 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 IGSF8Q969P0 613 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 TBC1D20Q96BZ9 403 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 KLHL32Q96NJ5 620 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 BTBD9Q96Q07 612 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 EFHD1Q9BUP0 239 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 SPATA16Q9BXB7 569 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 UPF3AQ9H1J1 476 aaKnown RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 GDF2Q9UK05 429 aaPredicted RBP5.33□□□□□ -1.56
VAPA-203ENST00000577539 GTF2A1LQ9UNN4 478 aa5.33□□□□□ -1.56
VAPA-203ENST00000577539 PLXNB2O15031 1838 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 SAC3D1A6NKF1 404 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 VSTM5A8MXK1 200 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 UBXN8O00124 270 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 PPP6CO00743 305 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 ANGPT2O15123 496 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 NRP2O60462 931 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 GOT2P00505 430 aaKnown RBP5.32□□□□□ -1.56
VAPA-203ENST00000577539 PRSS56P0CW18 603 aa5.32□□□□□ -1.56
VAPA-203ENST00000577539 HSPA8P11142 646 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms