RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 GSDMBQ8TAX9 411 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 HM13Q8TCT9 377 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 FIG4Q92562 907 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 ZKSCAN4Q969J2 545 aaPredicted RBP2.49□□□□□ -2.01
COPS3-213ENST00000577210 ERLEC1Q96DZ1 483 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 ELMOD3Q96FG2 381 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 SCMH1Q96GD3 660 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 ABHD8Q96I13 439 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 FAM84BQ96KN1 310 aaPredicted RBP2.49□□□□□ -2.01
COPS3-213ENST00000577210 LRRC1Q9BTT6 524 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 MOV10L1Q9BXT6 1211 aaKnown RBP2.49□□□□□ -2.01
COPS3-213ENST00000577210 DENND2DQ9H6A0 471 aaPredicted RBP2.49□□□□□ -2.01
COPS3-213ENST00000577210 EBF2Q9HAK2 575 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 CHMP1AQ9HD42 196 aaPredicted RBP2.49□□□□□ -2.01
COPS3-213ENST00000577210 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.49□□□□□ -2.01
COPS3-213ENST00000577210 TCP11L1Q9NUJ3 509 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 SETD4Q9NVD3 440 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 OCIAD1Q9NX40 245 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 MTMR10Q9NXD2 777 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 C1RLQ9NZP8 487 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 CPSF2Q9P2I0 782 aaKnown RBP2.49□□□□□ -2.01
COPS3-213ENST00000577210 CHORDC1Q9UHD1 332 aaPredicted RBP2.49□□□□□ -2.01
COPS3-213ENST00000577210 IL17BQ9UHF5 180 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 TINAGQ9UJW2 476 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 KLHL20Q9Y2M5 609 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 NME7Q9Y5B8 376 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 PCDHAC2Q9Y5I4 1007 aa2.49□□□□□ -2.01
COPS3-213ENST00000577210 SAA2-SAA4A0A096LPE2 208 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 A0A0G2JPF8 293 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 PLSCR5A0PG75 271 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 A6NL46 340 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 HNRNPCL2B2RXH8 293 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 HNRNPCL3B7ZW38 293 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 H0YIN7 160 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 IKBKBO14920 756 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 SLC28A2O43868 658 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 PRAMEF11O60813 436 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 WDR1O75083 606 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 KRT36O76013 467 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 PDE9AO76083 593 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 BEST1O76090 585 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 KDM4BO94953 1096 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 CAMTA2O94983 1202 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 PAPSS2O95340 614 aaPredicted RBP2.48□□□□□ -2.01
COPS3-213ENST00000577210 ICAM1P05362 532 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 SNRNP70P08621 437 aaKnown RBP2.48□□□□□ -2.01
COPS3-213ENST00000577210 LINC00271P0C7V0 271 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 HNRNPCL4P0DMR1 293 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 NR2F1P10589 423 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 POLR2CP19387 275 aaPredicted RBP2.48□□□□□ -2.01
COPS3-213ENST00000577210 S1PR1P21453 382 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 KCNA5P22460 613 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 SSTR2P30874 369 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 ACSL1P33121 698 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 APOBEC1P41238 236 aaKnown RBP2.48□□□□□ -2.01
COPS3-213ENST00000577210 GARSP41250 739 aaKnown RBP2.48□□□□□ -2.01
COPS3-213ENST00000577210 NRIP1P48552 1158 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 AMPHP49418 695 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 COMPP49747 757 aaPredicted RBP2.48□□□□□ -2.01
COPS3-213ENST00000577210 CLCN3P51790 818 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 PITX1P78337 314 aaPredicted RBP2.48□□□□□ -2.01
COPS3-213ENST00000577210 BNC1Q01954 994 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 PRPF4BQ13523 1007 aaKnown RBP2.48□□□□□ -2.01
COPS3-213ENST00000577210 SF3B4Q15427 424 aaKnown RBP eCLIP2.48□□□□□ -2.012e-6■■■□□ 16.9
COPS3-213ENST00000577210 MEP1AQ16819 746 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 IZUMO4Q1ZYL8 232 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 CCNYL2Q5T2Q4 361 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 PDSS1Q5T2R2 415 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 ZNF324BQ6AW86 544 aaPredicted RBP2.48□□□□□ -2.01
COPS3-213ENST00000577210 WBP2NLQ6ICG8 309 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 KIAA1161Q6NSJ0 714 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 TUBA1AQ71U36 451 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 MAP7D3Q8IWC1 876 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.48□□□□□ -2.01
COPS3-213ENST00000577210 SCYL3Q8IZE3 742 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 NAGSQ8N159 534 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 AVL9Q8NBF6 648 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 APPL2Q8NEU8 664 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 LILRB1Q8NHL6 650 aaPredicted RBP2.48□□□□□ -2.01
COPS3-213ENST00000577210 LNX1Q8TBB1 728 aaPredicted RBP2.48□□□□□ -2.01
COPS3-213ENST00000577210 ATL1Q8WXF7 558 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 PPP1R13BQ96KQ4 1090 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 EGLN2Q96KS0 407 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 CEP295NLQ96MC4 621 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 NEK1Q96PY6 1258 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 CMKLR1Q99788 373 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 TUBA1CQ9BQE3 449 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 SLF1Q9BQI6 1058 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 SYT17Q9BSW7 474 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 IL25Q9H293 177 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 PIGMQ9H3S5 423 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 RAD21L1Q9H4I0 556 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 PIH1D3Q9NQM4 214 aaKnown RBP2.48□□□□□ -2.01
COPS3-213ENST00000577210 PLSCR4Q9NRQ2 329 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 TMEM30AQ9NV96 361 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 FAM118AQ9NWS6 357 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 RCC2Q9P258 522 aaKnown RBP2.48□□□□□ -2.01
COPS3-213ENST00000577210 NFKBIL1Q9UBC1 381 aaPredicted RBP2.48□□□□□ -2.01
COPS3-213ENST00000577210 PADI1Q9ULC6 663 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 GRIP1Q9Y3R0 1128 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms