RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ABCB9Q9NP78 766 aa17.73■□□□□ 0.43
ATPAF1-214ENST00000576409 CNTN3Q9P232 1028 aa17.73■□□□□ 0.43
ATPAF1-214ENST00000576409 NUP98P52948 1817 aa17.73■□□□□ 0.43
ATPAF1-214ENST00000576409 CAPN14A8MX76 684 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 IFRD1O00458 451 aaPredicted RBP17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 PRKD3O94806 890 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 CYP3A5P20815 502 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 KRR1Q13601 381 aaKnown RBP17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 TARBP2Q15633 366 aaKnown RBP17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 CTC1Q2NKJ3 1217 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 KBTBD6Q86V97 674 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 P2RY8Q86VZ1 359 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 EBPLQ9BY08 206 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 OSGEPL1Q9H4B0 414 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 LRTM1Q9HBL6 345 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 RAB23Q9ULC3 237 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 SLC35E2BP0CK96 405 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 MRPS6P82932 125 aaKnown RBP17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 CDKL1Q00532 357 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 MXD1Q05195 221 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 SULT2A1Q06520 285 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 CNTN1Q12860 1018 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 SFSWAPQ12872 951 aaKnown RBP17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 TOP3AQ13472 1001 aaPredicted RBP17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 HNRNPDQ14103 355 aaKnown RBP17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 GRB7Q14451 532 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 ZNF284Q2VY69 593 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 DDI2Q5TDH0 399 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 SIX5Q8N196 739 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 CRYBG2Q8N1P7 616 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 ANKLE1Q8NAG6 615 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 FEM1CQ96JP0 617 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 FAM220BPB1ANY3 271 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 NDUFS2O75306 463 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 CCNKO75909 580 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 IQCF3P0C7M6 154 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 EPORP19235 508 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 CDK9P50750 372 aaKnown RBP17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 TRIQKQ629K1 86 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 SLC45A3Q96JT2 553 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 NPY6RQ99463 290 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 C10orf71Q711Q0 1435 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 NDST3O95803 873 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 RFX4Q33E94 735 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 KLHL35Q6PF15 583 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 CLIP4Q8N3C7 705 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 MRPS31Q92665 395 aaKnown RBP17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 DMRTB1Q96MA1 342 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 FCRL5Q96RD9 977 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 ATP6V1HQ9UI12 483 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 RAI2Q9Y5P3 530 aa17.72■□□□□ 0.43
ATPAF1-214ENST00000576409 JUNP05412 331 aaKnown RBP17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 SPIBQ01892 262 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 PLEKHM3Q6ZWE6 761 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 ERMP1Q7Z2K6 904 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 SPNS2Q8IVW8 549 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 C2orf73Q8N5S3 287 aaPredicted RBP17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 CLDN19Q8N6F1 224 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 SPPL2BQ8TCT7 592 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 BTN2A2Q8WVV5 523 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 ISOC1Q96CN7 298 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 SLC9A7Q96T83 725 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 SUCOQ9UBS9 1254 aaKnown RBP17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 VPS4AQ9UN37 437 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 PARP4Q9UKK3 1724 aaKnown RBP17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 ZNF142P52746 1687 aaPredicted RBP17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 RGS10O43665 173 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 CYP2A7P20853 494 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 SRP54P61011 504 aaKnown RBP17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 HERVK_113P63132 956 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 XKR6Q5GH73 641 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 SPATA19Q7Z5L4 167 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 RTL3Q8N8U3 475 aaKnown RBP17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 HM13Q8TCT9 377 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 RNFT2Q96EX2 444 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 ERVK-6Q9BXR3 956 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 DERAQ9Y315 318 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 LRP6O75581 1613 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 LOC110117498-PIK3R3F6TDL0 507 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 MYL12BO14950 172 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 CTSKP43235 329 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 AGTR2P50052 363 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 AIF1P55008 147 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 RPS24P62847 133 aaKnown RBP17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 INCA1Q0VD86 236 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 PRR23BQ6ZRT6 265 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 STK40Q8N2I9 435 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 MARVELD2Q8N4S9 558 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 PHF10Q8WUB8 498 aaKnown RBP17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 SORT1Q99523 831 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 PCDHB8Q9UN66 801 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 TESMINQ9Y4I5 508 aa17.71■□□□□ 0.43
ATPAF1-214ENST00000576409 SLC7A4O43246 635 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 SERPINA1P01009 418 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 IL4RP24394 825 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 KRT20P35900 424 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 IST1P53990 364 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 DENND5AQ6IQ26 1287 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 LIX1Q8N485 282 aa17.7■□□□□ 0.42
ATPAF1-214ENST00000576409 ARRDC4Q8NCT1 418 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms