RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 TRIM16O95361 564 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 CELA2BP08218 269 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 GIMD1P0DJR0 217 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 CKMT1AP12532 417 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 ACRV1P26436 265 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 CRADDP78560 199 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 ILKQ13418 452 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 BIRC2Q13490 618 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 KCTD19Q17RG1 926 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 PROX2Q3B8N5 592 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 ZNF648Q5T619 568 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 KCTD16Q68DU8 428 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 TMEM220Q6QAJ8 160 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 CERS6Q6ZMG9 384 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 SERPINA9Q86WD7 417 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 PDIK1LQ8N165 341 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 GABPB2Q8TAK5 448 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 NAT6Q93015 286 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 ERP44Q9BS26 406 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 TIMM29Q9BSF4 260 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 NAT9Q9BTE0 207 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 TRIM31Q9BZY9 425 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 FAM96AQ9H5X1 160 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 VPS37BQ9H9H4 285 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 ZDHHC3Q9NYG2 299 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 TAAR2Q9P1P5 351 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 GULP1Q9UBP9 304 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 PCDHGA1Q9Y5H4 931 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 MRFAP1Q9Y605 127 aa12.6□□□□□ -0.39
TRAPPC1-206ENST00000573989 TRBV5-4A0A0C4DH59 114 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 FAM237BA0A1B0GVD1 139 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 SPAARA0A1B0GVQ0 90 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 CCDC162PA2VCL2 907 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 CTAGE15A4D2H0 777 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 B4DGG1 531 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 GPR39O43194 453 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 ZW10O43264 779 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 RAD51CO43502 376 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 RFPL3O75679 317 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 SEC31AO94979 1220 aaKnown RBP12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 GOT2P00505 430 aaKnown RBP12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 POLBP06746 335 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 FTH1P19P0C7X4 201 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 CTAGE8P0CG41 777 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 ACP5P13686 325 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 ATP1B2P14415 290 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 ZNF7P17097 686 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 ACP1P24666 158 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 IVDP26440 423 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 AK4P27144 223 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 FOXN2P32314 431 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 NSG1P42857 185 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 MAGEA3P43357 314 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 ARSDP51689 593 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 CLCNKAP51800 687 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 ITGA8P53708 1063 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 ARL4CP56559 192 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 ITIH4Q14624 930 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 C8orf74Q6P047 294 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 CRTC3Q6UUV7 619 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 SDCCAG8Q86SQ7 713 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 CTAGE6Q86UF2 777 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 NRROSQ86YC3 692 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 CCNJLQ8IV13 435 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 CTAGE4Q8IX94 777 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 MPP5Q8N3R9 675 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 OTUD6BQ8N6M0 293 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 CEP112Q8N8E3 955 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 AVL9Q8NBF6 648 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 CCL4L1Q8NHW4 92 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 ZDHHC1Q8WTX9 485 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 ZNF778Q96MU6 729 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 OSGEPL1Q9H4B0 414 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 STN1Q9H668 368 aaKnown RBP12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 KLC4Q9NSK0 619 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 TREX1Q9NSU2 369 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 CATSPERZQ9NTU4 200 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 SIRPGQ9P1W8 387 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 WHRNQ9P202 907 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 SLC2A6Q9UGQ3 507 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 PRKAB1Q9Y478 270 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 MAD1L1Q9Y6D9 718 aa12.59□□□□□ -0.39
TRAPPC1-206ENST00000573989 EME2A4GXA9 379 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 OR2AG2A6NM03 316 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 OR5K4A6NMS3 321 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 USP1O94782 785 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 AP2A2O94973 939 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 TTC4O95801 387 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 GP1BAP07359 652 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 GSTM1P09488 218 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 IDSP22304 550 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 NMBRP28336 390 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 PMLP29590 882 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 TTPAP49638 278 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 E2F1Q01094 437 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 GSTM4Q03013 218 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 CAV1Q03135 178 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 DNAJC3Q13217 504 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 HIF1AQ16665 826 aa12.58□□□□□ -0.4
TRAPPC1-206ENST00000573989 PLA2G4EQ3MJ16 856 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms