RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CDKN1CP49918 316 aaPredicted RBP18.89■□□□□ 0.61
SCARF1-206ENST00000573852 IRF5Q13568 498 aa18.89■□□□□ 0.61
SCARF1-206ENST00000573852 ZNF235Q14590 738 aa18.89■□□□□ 0.61
SCARF1-206ENST00000573852 FXNQ16595 210 aa18.89■□□□□ 0.61
SCARF1-206ENST00000573852 PDCD4Q53EL6 469 aaKnown RBP18.89■□□□□ 0.61
SCARF1-206ENST00000573852 ATP6V0D2Q8N8Y2 350 aa18.89■□□□□ 0.61
SCARF1-206ENST00000573852 NUDT8Q8WV74 236 aa18.89■□□□□ 0.61
SCARF1-206ENST00000573852 RPRD1AQ96P16 312 aaPredicted RBP18.89■□□□□ 0.61
SCARF1-206ENST00000573852 YTHDF1Q9BYJ9 559 aaKnown RBP18.89■□□□□ 0.61
SCARF1-206ENST00000573852 UPK1AO00322 258 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 EPOP01588 193 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 ENO2P09104 434 aaPredicted RBP18.88■□□□□ 0.61
SCARF1-206ENST00000573852 IMPDH2P12268 514 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 OR1E1P30953 314 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 ERVK-8P63133 956 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 ZNF829Q3KNS6 432 aaPredicted RBP18.88■□□□□ 0.61
SCARF1-206ENST00000573852 C6orf136Q5SQH8 315 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 GLYATQ6IB77 296 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 ANKRD26P1Q6NSI1 321 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 ITIH5Q86UX2 942 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 RBM12BQ8IXT5 1001 aaKnown RBP18.88■□□□□ 0.61
SCARF1-206ENST00000573852 BTN2A3PQ96KV6 586 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 NSMCE3Q96MG7 304 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 BDH2Q9BUT1 245 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 MAGED1Q9Y5V3 778 aaPredicted RBP18.88■□□□□ 0.61
SCARF1-206ENST00000573852 FAM234BA2RU67 622 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 DRGXA6NNA5 263 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 PRAMEF11O60813 436 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 CHEK2O96017 543 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 ALBP02768 609 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 TYMPP19971 482 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 SHMT2P34897 504 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 HK3P52790 923 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 NAA20P61599 178 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 MGAT3Q09327 533 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 SELPLGQ14242 412 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 PARP15Q460N3 678 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 HABP4Q5JVS0 413 aaKnown RBP18.88■□□□□ 0.61
SCARF1-206ENST00000573852 C9orf131Q5VYM1 1079 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 CXCL17Q6UXB2 119 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 PROSER1Q86XN7 944 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 KLHDC9Q8NEP7 349 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 SMIM14Q96QK8 99 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 TRIB3Q96RU7 358 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 C1QTNF3Q9BXJ4 246 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 LRRC3Q9BY71 257 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 ZFYVE28Q9HCC9 887 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 NLE1Q9NVX2 485 aaPredicted RBP18.88■□□□□ 0.61
SCARF1-206ENST00000573852 SUN2Q9UH99 717 aa18.88■□□□□ 0.61
SCARF1-206ENST00000573852 SYCE1LA8MT33 242 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 H0YAE9 185 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 STX16O14662 325 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 KLK8O60259 260 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 B4GALT3O60512 393 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 OR4F21O95013 312 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 CPNE6O95741 557 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 TCF3P15923 654 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 ZNF140P52738 457 aaPredicted RBP18.87■□□□□ 0.61
SCARF1-206ENST00000573852 GRSF1Q12849 480 aaKnown RBP eCLIP18.87■□□□□ 0.61
SCARF1-206ENST00000573852 ZBTB46Q86UZ6 589 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 HID1Q8IV36 788 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 TERB1Q8NA31 727 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 FNDC5Q8NAU1 212 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 KLHL23Q8NBE8 558 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 PDPRQ8NCN5 879 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 OR4K2Q8NGD2 314 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 OR13F1Q8NGS4 319 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 BORCS5Q969J3 196 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 NSMCE2Q96MF7 247 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 CDK15Q96Q40 435 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 CCDC68Q9H2F9 335 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 TBC1D23Q9NUY8 699 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 ZIM2Q9NZV7 527 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 Q9Y3F1 56 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 A0A0U1RQF3 1178 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 SYNCRIPO60506 623 aaKnown RBP18.87■□□□□ 0.61
SCARF1-206ENST00000573852 SOAT2O75908 522 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 ZNF182P17025 639 aaPredicted RBP18.87■□□□□ 0.61
SCARF1-206ENST00000573852 UGT1A1P22309 533 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 UGT1A4P22310 534 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 UGT1A3P35503 534 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 UGT1A5P35504 534 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 PTPRNQ16849 979 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 DLEU7Q6UYE1 221 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 Q6ZSR9 355 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 DTWD1Q8N5C7 304 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 CDYL2Q8N8U2 506 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 ACDQ96AP0 544 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 PPM1MQ96MI6 270 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 MTG1Q9BT17 334 aaPredicted RBP18.87■□□□□ 0.61
SCARF1-206ENST00000573852 FANCEQ9HB96 536 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 EIF2B4Q9UI10 523 aaKnown RBP18.87■□□□□ 0.61
SCARF1-206ENST00000573852 RIMKLBQ9ULI2 386 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 NDUFS3O75489 264 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 NDST3O95803 873 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 MLYCDO95822 493 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 TSPAN12O95859 305 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 CDH1P12830 882 aa18.87■□□□□ 0.61
SCARF1-206ENST00000573852 EEF1B2P24534 225 aaKnown RBP18.87■□□□□ 0.61
SCARF1-206ENST00000573852 ARSFP54793 590 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms