RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 MTG1Q9BT17 334 aaPredicted RBP15.5■□□□□ 0.07
NUP88-207ENST00000573584 PFDN4Q9NQP4 134 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 GMIPQ9P107 970 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 CPA4Q9UI42 421 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 PCTPQ9UKL6 214 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 ZNF711Q9Y462 761 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 FAM234BA2RU67 622 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 SYNCRIPO60506 623 aaKnown RBP15.5■□□□□ 0.07
NUP88-207ENST00000573584 ZNF623O75123 536 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 NDUFS3O75489 264 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 HMBSP08397 361 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 CD52P31358 61 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 MAPK10P53779 464 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 C21orf59P57076 290 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 PARP15Q460N3 678 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 GDF6Q6KF10 455 aaPredicted RBP15.5■□□□□ 0.07
NUP88-207ENST00000573584 HID1Q8IV36 788 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 DCBLD1Q8N8Z6 715 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 KLHL23Q8NBE8 558 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 PROKR1Q8TCW9 393 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 BPIFB1Q8TDL5 484 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 ZIM2Q9NZV7 527 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 PADI3Q9ULW8 664 aa15.5■□□□□ 0.07
NUP88-207ENST00000573584 STX16O14662 325 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 SERPINF2P08697 491 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 UGT1A1P22309 533 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 UGT1A4P22310 534 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 UGT1A3P35503 534 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 UGT1A5P35504 534 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 PRKG2Q13237 762 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 C6orf136Q5SQH8 315 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 NTN4Q9HB63 628 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 RIC8BQ9NVN3 520 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 TMEM9Q9P0T7 183 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 PCDHGA11Q9Y5H2 935 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 TRIM64BA6NI03 449 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 H0Y858 1186 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 ZNF182P17025 639 aaPredicted RBP15.49■□□□□ 0.07
NUP88-207ENST00000573584 TYMPP19971 482 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 MATN1P21941 496 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 MAP4P27816 1152 aaKnown RBP15.49■□□□□ 0.07
NUP88-207ENST00000573584 ARSFP54793 590 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 GRSF1Q12849 480 aaKnown RBP eCLIP15.49■□□□□ 0.07
NUP88-207ENST00000573584 TRAF2Q12933 501 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 BTG3Q14201 252 aaPredicted RBP15.49■□□□□ 0.07
NUP88-207ENST00000573584 ANKRD26P1Q6NSI1 321 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 ZNF773Q6PK81 442 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 RIMKLAQ8IXN7 391 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 SFRP1Q8N474 314 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 CDYL2Q8N8U2 506 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 OR56A4Q8NGH8 313 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 PLEKHA8Q96JA3 519 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 ING2Q9H160 280 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 FBXO44Q9H4M3 255 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 FANCEQ9HB96 536 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 TLR9Q9NR96 1032 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 Q9Y3F1 56 aa15.49■□□□□ 0.07
NUP88-207ENST00000573584 MYADML2A6NDP7 307 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 PRAMEF11O60813 436 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 CBFA2T3O75081 653 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 NPPAP01160 153 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 CDH1P12830 882 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 CCNA2P20248 432 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 FXNQ16595 210 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 PTPRNQ16849 979 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 TXNDC11Q6PKC3 985 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 GPRIN3Q6ZVF9 776 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 NKAPQ8N5F7 415 aaKnown RBP15.48■□□□□ 0.07
NUP88-207ENST00000573584 DDHD1Q8NEL9 900 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 OR4K2Q8NGD2 314 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 OR13F1Q8NGS4 319 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 CNDP2Q96KP4 475 aaKnown RBP15.48■□□□□ 0.07
NUP88-207ENST00000573584 PPM1MQ96MI6 270 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 C1QTNF3Q9BXJ4 246 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 NLE1Q9NVX2 485 aaPredicted RBP15.48■□□□□ 0.07
NUP88-207ENST00000573584 MAGEL2Q9UJ55 1249 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 RIMKLBQ9ULI2 386 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 A0A0U1RQF3 1178 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 CPNE6O95741 557 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 NDST3O95803 873 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 INHBBP09529 407 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 MBL2P11226 248 aaPredicted RBP15.48■□□□□ 0.07
NUP88-207ENST00000573584 PCNAP12004 261 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 GRK4P32298 578 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 ALDH3A2P51648 485 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 NFATC3Q12968 1075 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 ATP6AP1LQ52LC2 224 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 ITIH5Q86UX2 942 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 CLEC4FQ8N1N0 589 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 GPR152Q8TDT2 470 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 TANKQ92844 425 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 ACDQ96AP0 544 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 PCDHB3Q9Y5E6 796 aa15.48■□□□□ 0.07
NUP88-207ENST00000573584 DRGXA6NNA5 263 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 KLK8O60259 260 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 DEAF1O75398 565 aaPredicted RBP15.47■□□□□ 0.07
NUP88-207ENST00000573584 OR4F21O95013 312 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 MOGQ16653 247 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 GNASQ5JWF2 1037 aa15.47■□□□□ 0.07
NUP88-207ENST00000573584 C16orf87Q6PH81 154 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms