RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SKOR1P84550 965 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 SMAD4Q13485 552 aaKnown RBP10.01□□□□□ -0.81
SMG6-213ENST00000573166 DGKKQ5KSL6 1271 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 EGFLAMQ63HQ2 1017 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 IL27RAQ6UWB1 636 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 LAYNQ6UX15 382 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 PCYOX1LQ8NBM8 494 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 SLC26A7Q8TE54 656 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 MTFMTQ96DP5 389 aaKnown RBP10.01□□□□□ -0.81
SMG6-213ENST00000573166 NUF2Q9BZD4 464 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 CXorf49A8MYA2 514 aaPredicted RBP10.01□□□□□ -0.81
SMG6-213ENST00000573166 SEC22BO75396 215 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 ITPKAP23677 461 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 HNF4AP41235 474 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 MNX1P50219 401 aaPredicted RBP10.01□□□□□ -0.81
SMG6-213ENST00000573166 NAE1Q13564 534 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 ATP6AP1LQ52LC2 224 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 SNAP47Q5SQN1 464 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 Q7L0L9 218 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 IFNEQ86WN2 208 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 KRT78Q8N1N4 520 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 CDYL2Q8N8U2 506 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 MIPOL1Q8TD10 442 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 REPS1Q96D71 796 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 ARHGEF3Q9NR81 526 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 SLC17A7Q9P2U7 560 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 GMEB2Q9UKD1 530 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 TMEM98Q9Y2Y6 226 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 COLEC10Q9Y6Z7 277 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 RBBP6Q7Z6E9 1792 aaKnown RBP10.01□□□□□ -0.81
SMG6-213ENST00000573166 IGLON5A6NGN9 336 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 POP7O75817 140 aaKnown RBP10.01□□□□□ -0.81
SMG6-213ENST00000573166 PAPSS2O95340 614 aaPredicted RBP10.01□□□□□ -0.81
SMG6-213ENST00000573166 HNRNPLP14866 589 aaKnown RBP eCLIP10.01□□□□□ -0.813e-10■■■■□ 26.4
SMG6-213ENST00000573166 CXCR2P25025 360 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 EEF1DP29692 281 aaKnown RBP10.01□□□□□ -0.81
SMG6-213ENST00000573166 SCTRP47872 440 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 ARF5P84085 180 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 ACSM2AQ08AH3 577 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 ITIH4Q14624 930 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 SF1Q15637 639 aaKnown RBP10.01□□□□□ -0.81
SMG6-213ENST00000573166 ZNF77Q15935 545 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 FBXO48Q5FWF7 155 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 XKR6Q5GH73 641 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 ACSM2BQ68CK6 577 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 LRRTM4Q86VH4 590 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 FAM46DQ8NEK8 389 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 MAFAQ8NHW3 353 aaPredicted RBP10.01□□□□□ -0.81
SMG6-213ENST00000573166 WBP2Q969T9 261 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 CCDC124Q96CT7 223 aaKnown RBP10.01□□□□□ -0.81
SMG6-213ENST00000573166 KLHDC7BQ96G42 594 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 C12orf66Q96MD2 445 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 EFHD1Q9BUP0 239 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 MECRQ9BV79 373 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 NLNQ9BYT8 704 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 KCNK12Q9HB15 430 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 IL1RL2Q9HB29 575 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 TCF7L2Q9NQB0 619 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 TMCO1Q9UM00 188 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 FAM92AA1XBS5 289 aa10□□□□□ -0.81
SMG6-213ENST00000573166 PSMD12O00232 456 aaPredicted RBP10□□□□□ -0.81
SMG6-213ENST00000573166 CACNG3O60359 315 aa10□□□□□ -0.81
SMG6-213ENST00000573166 RNGTTO60942 597 aaKnown RBP10□□□□□ -0.81
SMG6-213ENST00000573166 MLYCDO95822 493 aa10□□□□□ -0.81
SMG6-213ENST00000573166 AHSGP02765 367 aa10□□□□□ -0.81
SMG6-213ENST00000573166 ANXA6P08133 673 aa10□□□□□ -0.81
SMG6-213ENST00000573166 ADRB3P13945 408 aa10□□□□□ -0.81
SMG6-213ENST00000573166 SOAT1P35610 550 aa10□□□□□ -0.81
SMG6-213ENST00000573166 WDR45BQ5MNZ6 344 aa10□□□□□ -0.81
SMG6-213ENST00000573166 TEDDM1Q5T9Z0 273 aa10□□□□□ -0.81
SMG6-213ENST00000573166 CAPN13Q6MZZ7 669 aaPredicted RBP10□□□□□ -0.81
SMG6-213ENST00000573166 SLC30A9Q6PML9 568 aa10□□□□□ -0.81
SMG6-213ENST00000573166 PAQR3Q6TCH7 311 aa10□□□□□ -0.81
SMG6-213ENST00000573166 IGDCC3Q8IVU1 814 aa10□□□□□ -0.81
SMG6-213ENST00000573166 ZNF276Q8N554 614 aa10□□□□□ -0.81
SMG6-213ENST00000573166 FNDC5Q8NAU1 212 aa10□□□□□ -0.81
SMG6-213ENST00000573166 GLMNQ92990 594 aa10□□□□□ -0.81
SMG6-213ENST00000573166 RAD51AP1Q96B01 352 aa10□□□□□ -0.81
SMG6-213ENST00000573166 SDCCAG3Q96C92 435 aa10□□□□□ -0.81
SMG6-213ENST00000573166 CMTM5Q96DZ9 223 aa10□□□□□ -0.81
SMG6-213ENST00000573166 SCRN2Q96FV2 425 aa10□□□□□ -0.81
SMG6-213ENST00000573166 ZDBF2Q9HCK1 2354 aa10□□□□□ -0.81
SMG6-213ENST00000573166 ANLNQ9NQW6 1124 aa10□□□□□ -0.81
SMG6-213ENST00000573166 KLHL3Q9UH77 587 aa10□□□□□ -0.81
SMG6-213ENST00000573166 TMEM114B3SHH9 223 aa10□□□□□ -0.81
SMG6-213ENST00000573166 SHOX2O60902 331 aaPredicted RBP10□□□□□ -0.81
SMG6-213ENST00000573166 ATP1B2P14415 290 aaPredicted RBP10□□□□□ -0.81
SMG6-213ENST00000573166 CTHP32929 405 aa10□□□□□ -0.81
SMG6-213ENST00000573166 GPC1P35052 558 aa10□□□□□ -0.81
SMG6-213ENST00000573166 ALDH9A1P49189 494 aa10□□□□□ -0.81
SMG6-213ENST00000573166 BST1Q10588 318 aa10□□□□□ -0.81
SMG6-213ENST00000573166 TSNQ15631 228 aaKnown RBP10□□□□□ -0.81
SMG6-213ENST00000573166 TXNDC11Q6PKC3 985 aa10□□□□□ -0.81
SMG6-213ENST00000573166 RANBP10Q6VN20 620 aa10□□□□□ -0.81
SMG6-213ENST00000573166 C17orf64Q86WR6 236 aa10□□□□□ -0.81
SMG6-213ENST00000573166 C10orf107Q8IVU9 208 aa10□□□□□ -0.81
SMG6-213ENST00000573166 FAM9CQ8IZT9 166 aa10□□□□□ -0.81
SMG6-213ENST00000573166 LCN9Q8WX39 176 aa10□□□□□ -0.81
SMG6-213ENST00000573166 UBE2E3Q969T4 207 aa10□□□□□ -0.81
SMG6-213ENST00000573166 CHFRQ96EP1 664 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms