RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 FPR3P25089 353 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 GABRR2P28476 465 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 DUSP1P28562 367 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 NMT1P30419 496 aaKnown RBP5.58□□□□□ -1.52
SF3B3-214ENST00000572365 MCM7P33993 719 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 FOXL2P58012 376 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 KRTAP10-2P60368 255 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 RAE1P78406 368 aaKnown RBP5.58□□□□□ -1.52
SF3B3-214ENST00000572365 KARSQ15046 597 aaKnown RBP5.58□□□□□ -1.52
SF3B3-214ENST00000572365 NAB2Q15742 525 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 DUOXA1Q1HG43 343 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 KIF26BQ2KJY2 2108 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 CTXN3Q4LDR2 81 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 XKR3Q5GH77 459 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 LRCH2Q5VUJ6 765 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 LYSMD4Q5XG99 296 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 ANKRD40Q6AI12 368 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 CRIP3Q6Q6R5 217 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 DHRS13Q6UX07 377 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 BBS12Q6ZW61 710 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 NIPA1Q7RTP0 329 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 TMC8Q8IU68 726 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 CNNM3Q8NE01 707 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 CEP70Q8NHQ1 597 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 KTI12Q96EK9 354 aaPredicted RBP5.58□□□□□ -1.52
SF3B3-214ENST00000572365 TRMT61AQ96FX7 289 aaKnown RBP5.58□□□□□ -1.52
SF3B3-214ENST00000572365 LINC00597Q9H2U6 94 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 TOR3AQ9H497 397 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 NOD2Q9HC29 1040 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 CD93Q9NPY3 652 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 DIAPH3Q9NSV4 1193 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 TMEM160Q9NX00 188 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 IL17BQ9UHF5 180 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 FBXL5Q9UKA1 691 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 BAG5Q9UL15 447 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 BTBD3Q9Y2F9 522 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 MYRFQ9Y2G1 1151 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 CITO14578 2027 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 C2CD3Q4AC94 2353 aa5.58□□□□□ -1.52
SF3B3-214ENST00000572365 LRBAP50851 2863 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 CELSR2Q9HCU4 2923 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 K7EQS6 105 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 ZNF500O60304 480 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-214ENST00000572365 KLF8O95600 359 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-214ENST00000572365 SERPINF2P08697 491 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 DRD4P21917 467 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 GALNSP34059 522 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 DDIT3P35638 169 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 JAK3P52333 1124 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 OSTNP61366 133 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 VAMP2P63027 116 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 CFHR3Q02985 330 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 MBTD1Q05BQ5 628 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 NCBP1Q09161 790 aaKnown RBP5.57□□□□□ -1.52
SF3B3-214ENST00000572365 SLC12A1Q13621 1099 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 PCID2Q5JVF3 399 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 HECTD2Q5U5R9 776 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 KIRREL2Q6UWL6 708 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 ZNF627Q7L945 461 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 DNAJB7Q7Z6W7 309 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-214ENST00000572365 GPR65Q8IYL9 337 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 ESX1Q8N693 406 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 ALLCQ8N6M5 410 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 MAB21L3Q8N8X9 362 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 ATAD1Q8NBU5 361 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 PSPC1Q8WXF1 523 aaKnown RBP5.57□□□□□ -1.52
SF3B3-214ENST00000572365 RSPH1Q8WYR4 309 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 MPP4Q96JB8 637 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 CYP2S1Q96SQ9 504 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 NPAS1Q99742 590 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 TEKT3Q9BXF9 490 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 RNF26Q9BY78 433 aaPredicted RBP5.57□□□□□ -1.52
SF3B3-214ENST00000572365 GRPEL1Q9HAV7 217 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 USP29Q9HBJ7 922 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 ABHD10Q9NUJ1 306 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 SEMA5BQ9P283 1151 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 RAB21Q9UL25 225 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 FZD4Q9ULV1 537 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 DNAJC16Q9Y2G8 782 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 WNT6Q9Y6F9 365 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 OBSL1O75147 1896 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 FBN2P35556 2912 aa5.57□□□□□ -1.52
SF3B3-214ENST00000572365 MYH10P35580 1976 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 ANAPC1Q9H1A4 1944 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 PLXND1Q9Y4D7 1925 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 SPTBN1Q01082 2364 aaKnown RBP5.56□□□□□ -1.52
SF3B3-214ENST00000572365 BSNQ9UPA5 3926 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 KRTAP9-7A8MTY7 169 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 PRRT4C9JH25 899 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 SGK1O00141 431 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 MATN3O15232 486 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 HNRNPRO43390 633 aaKnown RBP5.56□□□□□ -1.52
SF3B3-214ENST00000572365 GJB3O75712 270 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 EDN1P05305 212 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 APEHP13798 732 aaKnown RBP5.56□□□□□ -1.52
SF3B3-214ENST00000572365 KRT4P19013 534 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 CALRP27797 417 aaKnown RBP5.56□□□□□ -1.52
SF3B3-214ENST00000572365 ADSSP30520 456 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 P2RY2P41231 377 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 RARRES1P49788 294 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms