RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 TMEM115Q12893 351 aaPredicted RBP14.35□□□□□ -0.11
LITAF-208ENST00000571627 MSLNQ13421 630 aaPredicted RBP14.35□□□□□ -0.11
LITAF-208ENST00000571627 SNX1Q13596 522 aa14.35□□□□□ -0.11
LITAF-208ENST00000571627 TAF1AQ15573 450 aaPredicted RBP14.35□□□□□ -0.11
LITAF-208ENST00000571627 ZDHHC20Q5W0Z9 365 aa14.35□□□□□ -0.11
LITAF-208ENST00000571627 KCTD11Q693B1 232 aa14.35□□□□□ -0.11
LITAF-208ENST00000571627 LRRTM4Q86VH4 590 aa14.35□□□□□ -0.11
LITAF-208ENST00000571627 TRAPPC5Q8IUR0 188 aa14.35□□□□□ -0.11
LITAF-208ENST00000571627 KLHDC8BQ8IXV7 354 aa14.35□□□□□ -0.11
LITAF-208ENST00000571627 SLC35F6Q8N357 371 aa14.35□□□□□ -0.11
LITAF-208ENST00000571627 OR13C4Q8NGS5 318 aa14.35□□□□□ -0.11
LITAF-208ENST00000571627 LIN37Q96GY3 246 aaPredicted RBP14.35□□□□□ -0.11
LITAF-208ENST00000571627 NAF1Q96HR8 494 aaKnown RBP14.35□□□□□ -0.11
LITAF-208ENST00000571627 TMEM74Q96NL1 305 aa14.35□□□□□ -0.11
LITAF-208ENST00000571627 NAP1L3Q99457 506 aaPredicted RBP14.35□□□□□ -0.11
LITAF-208ENST00000571627 PIH1D1Q9NWS0 290 aaKnown RBP14.35□□□□□ -0.11
LITAF-208ENST00000571627 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.35□□□□□ -0.112e-6■□□□□ 8.7
LITAF-208ENST00000571627 FEZ2Q9UHY8 353 aaPredicted RBP14.35□□□□□ -0.11
LITAF-208ENST00000571627 FKBPLQ9UIM3 349 aa14.35□□□□□ -0.11
LITAF-208ENST00000571627 LHX6Q9UPM6 363 aa14.35□□□□□ -0.11
LITAF-208ENST00000571627 DRG1Q9Y295 367 aaKnown RBP14.35□□□□□ -0.11
LITAF-208ENST00000571627 PTPRQQ9UMZ3 2332 aa14.35□□□□□ -0.11
LITAF-208ENST00000571627 IGHV1OR21-1A0A087WYE8 117 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 C2orf81A6NN90 581 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 CCL22O00626 93 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 KMOO15229 486 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 VEGFDO43915 354 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 TNFSF15O95150 251 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 PRAMEF1O95521 474 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 CPNE6O95741 557 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 F3P13726 295 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 ZNF7P17097 686 aaPredicted RBP14.34□□□□□ -0.11
LITAF-208ENST00000571627 CD1CP29017 333 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 RBMS1P29558 406 aaKnown RBP14.34□□□□□ -0.11
LITAF-208ENST00000571627 CSF2RBP32927 897 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 FASLGP48023 281 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 HHEXQ03014 270 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 ZFP36L1Q07352 338 aaKnown RBP14.34□□□□□ -0.11
LITAF-208ENST00000571627 NFATC2Q13469 925 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 SIX1Q15475 284 aaPredicted RBP14.34□□□□□ -0.11
LITAF-208ENST00000571627 SEPT7Q16181 437 aaKnown RBP14.34□□□□□ -0.11
LITAF-208ENST00000571627 PHF19Q5T6S3 580 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 GPRC6AQ5T6X5 926 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 IYDQ6PHW0 289 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 RAB11FIP2Q7L804 512 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 PRUNE1Q86TP1 453 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 PIM3Q86V86 326 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 SLITRK4Q8IW52 837 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 LSMEM2Q8N112 164 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 RASGEF1CQ8N431 466 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 CCDC89Q8N998 374 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 BRSK1Q8TDC3 778 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 NAT14Q8WUY8 206 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 ZNF578Q96N58 590 aaPredicted RBP14.34□□□□□ -0.11
LITAF-208ENST00000571627 SLC46A1Q96NT5 459 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 STRADBQ9C0K7 418 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 LRRC40Q9H9A6 602 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 KCNK4Q9NYG8 393 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 TTC7AQ9ULT0 858 aaPredicted RBP14.34□□□□□ -0.11
LITAF-208ENST00000571627 PCDHGA8Q9Y5G5 932 aa14.34□□□□□ -0.11
LITAF-208ENST00000571627 IGSF10Q6WRI0 2623 aa14.33□□□□□ -0.11
LITAF-208ENST00000571627 ERI2A8K979 691 aaKnown RBP14.33□□□□□ -0.12
LITAF-208ENST00000571627 PLD2O14939 933 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 PPFIA2O75334 1257 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 IFNB1P01574 187 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 HOXB3P14651 431 aaPredicted RBP14.33□□□□□ -0.12
LITAF-208ENST00000571627 TPH1P17752 444 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 ITIH1P19827 911 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 MPSTP25325 297 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 FDFT1P37268 417 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 GPR3P46089 330 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 PPM1FP49593 454 aaPredicted RBP14.33□□□□□ -0.12
LITAF-208ENST00000571627 ZNF140P52738 457 aaPredicted RBP14.33□□□□□ -0.12
LITAF-208ENST00000571627 CTSCP53634 463 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 PCBP4P57723 403 aaKnown RBP14.33□□□□□ -0.12
LITAF-208ENST00000571627 ERVPABLB-1P60509 514 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 CFHR1Q03591 330 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 ITGA9Q13797 1035 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 GTF2H3Q13889 308 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.33□□□□□ -0.12
LITAF-208ENST00000571627 C4orf22Q6V702 233 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 ZNF574Q6ZN55 896 aaPredicted RBP14.33□□□□□ -0.12
LITAF-208ENST00000571627 C11orf96Q7Z7L8 435 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 FBXO39Q8N4B4 442 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 RASGEF1AQ8N9B8 481 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 DDHD1Q8NEL9 900 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 DTX3LQ8TDB6 740 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 TTC25Q96NG3 672 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 SLC38A3Q99624 504 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 TIMM29Q9BSF4 260 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 ZMYND15Q9H091 742 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 ARNT2Q9HBZ2 717 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 THSD1Q9NS62 852 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 TMEM9Q9P0T7 183 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 SCHIP1Q9P0W5 487 aaPredicted RBP14.33□□□□□ -0.12
LITAF-208ENST00000571627 PAK5Q9P286 719 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 PISDQ9UG56 409 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 LOXL2Q9Y4K0 774 aa14.33□□□□□ -0.12
LITAF-208ENST00000571627 IGHV5-10-1A0A0J9YXX1 117 aa14.32□□□□□ -0.12
LITAF-208ENST00000571627 PRR19A6NJB7 356 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms