RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 B4GALT3O60512 393 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 CYP1A2P05177 515 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 DESP17661 470 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 SLC1A1P43005 524 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 SCNN1GP51170 649 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 NDST1P52848 882 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 RAD23BP54727 409 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 TSPY1Q01534 308 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 CKAP4Q07065 602 aaKnown RBP7.21□□□□□ -1.26
CNOT1-222ENST00000570139 EPS8Q12929 822 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 UPP1Q16831 310 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 WHAMMP3Q1A5X7 153 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 AASDHQ4L235 1098 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-222ENST00000570139 PAPD7Q5XG87 772 aaKnown RBP7.21□□□□□ -1.26
CNOT1-222ENST00000570139 ARHGAP17Q68EM7 881 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 DCLRE1AQ6PJP8 1040 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 LCLAT1Q6UWP7 414 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 ADGRG6Q86SQ4 1221 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 METTL23Q86XA0 190 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 ZDHHC17Q8IUH5 632 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 ADGRF2Q8IZF7 708 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 TAGAPQ8N103 731 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 CRYBG2Q8N1P7 616 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 ZNF808Q8N4W9 903 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-222ENST00000570139 CEP112Q8N8E3 955 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 SLC4A11Q8NBS3 891 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 MNS1Q8NEH6 495 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 ATG4AQ8WYN0 398 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 ARRDC3Q96B67 414 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 MIEF2Q96C03 454 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 ZNF653Q96CK0 615 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 RADILQ96JH8 1075 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 LENG8Q96PV6 779 aaPredicted RBP7.21□□□□□ -1.26
CNOT1-222ENST00000570139 LRRC37BQ96QE4 947 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 NEU1Q99519 415 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 THAP2Q9H0W7 228 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 PARVAQ9NVD7 372 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 HCFC1R1Q9NWW0 138 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 ADAM22Q9P0K1 906 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 STK39Q9UEW8 545 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 GIMAP2Q9UG22 337 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 RAB21Q9UL25 225 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 SH3BP1Q9Y3L3 701 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 HYOU1Q9Y4L1 999 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 SAR1BQ9Y6B6 198 aa7.21□□□□□ -1.26
CNOT1-222ENST00000570139 MICAL3Q7RTP6 2002 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 A0A1B0GTL3 188 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 AGAP5A6NIR3 686 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 A8MXQ7 604 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 TMCO5BA8MYB1 307 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 PTGES3LE9PB15 166 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 M0QZQ0 153 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 O00370 1275 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 CYB561D2O14569 222 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 VILLO15195 856 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 SLU7O95391 586 aaKnown RBP7.2□□□□□ -1.26
CNOT1-222ENST00000570139 MOCS3O95396 460 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 APOA4P06727 396 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 ACP5P13686 325 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 TYMPP19971 482 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 GNL1P36915 607 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-222ENST00000570139 CLCNKBP51801 687 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 CDH15P55291 814 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 FAM3BP58499 235 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-222ENST00000570139 RPL15P61313 204 aaKnown RBP7.2□□□□□ -1.26
CNOT1-222ENST00000570139 OCA2Q04671 838 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 TLE3Q04726 772 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 DSC1Q08554 894 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 ELAVL2Q12926 359 aaKnown RBP7.2□□□□□ -1.26
CNOT1-222ENST00000570139 SOWAHAQ2M3V2 549 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 ZNF385BQ569K4 471 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 RUNDC3AQ59EK9 446 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 NAIF1Q69YI7 327 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-222ENST00000570139 SLC9A4Q6AI14 798 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 CYP20A1Q6UW02 462 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 IKBIPQ70UQ0 350 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 MON1BQ7L1V2 547 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 SLFN11Q7Z7L1 901 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 PRPF39Q86UA1 669 aaKnown RBP7.2□□□□□ -1.26
CNOT1-222ENST00000570139 MCOLN2Q8IZK6 566 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 LRRC43Q8N309 656 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 TMEM199Q8N511 208 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 METTL25Q8N6Q8 603 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 UBL4BQ8N7F7 174 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 Q8NA96 180 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 DBF4BQ8NFT6 615 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 TNIP2Q8NFZ5 429 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-222ENST00000570139 ZNF564Q8TBZ8 553 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-222ENST00000570139 NPIPB3Q92617 1050 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 RSPRY1Q96DX4 576 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 FAM84AQ96KN4 292 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 OR14A2Q96R54 314 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 NR1H4Q96RI1 486 aaPredicted RBP7.2□□□□□ -1.26
CNOT1-222ENST00000570139 DCLRE1CQ96SD1 692 aaKnown RBP7.2□□□□□ -1.26
CNOT1-222ENST00000570139 PCDHB18PQ96TA0 734 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 YME1L1Q96TA2 773 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 NCAPGQ9BPX3 1015 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 TMEM175Q9BSA9 504 aa7.2□□□□□ -1.26
CNOT1-222ENST00000570139 SDCBP2Q9H190 292 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms