RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243		Q75L30	129 aa		3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	GSTA5	Q7RTV2	222 aa		3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	PIWIL4	Q7Z3Z4	852 aa	Known RBP	3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	PRAG1	Q86YV5	1406 aa		3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	ADSSL1	Q8N142	457 aa		3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	ESX1	Q8N693	406 aa		3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	DDHD1	Q8NEL9	900 aa		3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	PSPC1	Q8WXF1	523 aa	Known RBP	3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	FAM149B1	Q96BN6	582 aa		3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	ZNF653	Q96CK0	615 aa		3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	RRNAD1	Q96FB5	475 aa	Known RBP	3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	NEUROD6	Q96NK8	337 aa		3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	MAP7D2	Q96T17	732 aa		3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	RBM4B	Q9BQ04	359 aa	Known RBP	3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	TRIM51	Q9BSJ1	452 aa		3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	PCGF1	Q9BSM1	259 aa		3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	USP44	Q9H0E7	712 aa		3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	BICC1	Q9H694	974 aa	Known RBP	3.06	□□□□□ -1.92
UBR1-209	ENST00000569243	C5orf60	A6NFR6	353 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243		M0QZ24	198 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	CLIC2	O15247	247 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	PAGE4	O60829	102 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	DAB1	O75553	588 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	TSHB	P01222	138 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	CD48	P09326	243 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	FAM157C	P0CG43	387 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	MCC	P23508	829 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	DSCR10	P59022	87 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	RPL7A	P62424	266 aa	Known RBP	3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	IRX6	P78412	446 aa	Predicted RBP	3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	MRPS5	P82675	430 aa	Known RBP	3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	CCNG2	Q16589	344 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	ASPRV1	Q53RT3	343 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	SPINK14	Q6IE38	97 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	SGCD	Q92629	289 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	GTF3C6	Q969F1	213 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	IGSF8	Q969P0	613 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	MOCOS	Q96EN8	888 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	MCRIP2	Q9BUT9	160 aa	Known RBP	3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	SLC25A18	Q9H1K4	315 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	PDZD7	Q9H5P4	517 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	JMJD4	Q9H9V9	463 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	PAK5	Q9P286	719 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	TMEM98	Q9Y2Y6	226 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	CAPN7	Q9Y6W3	813 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	PCNX3	Q9H6A9	2034 aa		3.05	□□□□□ -1.92
UBR1-209	ENST00000569243	TDRD15	B5MCY1	1934 aa	Known RBP	3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	FAM237A	A0A1B0GTK4	181 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243		A0A1B0GVC2	190 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	C15orf62	A8K5M9	175 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243		H7C423	109 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	ZNF821	O75541	412 aa	Predicted RBP	3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	EML2	O95834	649 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	DPEP1	P16444	411 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	KRT9	P35527	623 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	MRPS34	P82930	218 aa	Known RBP	3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	SPOCK1	Q08629	439 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	COL28A1	Q2UY09	1125 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	ZNF790	Q6PG37	636 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	TRIM65	Q6PJ69	517 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	PLXDC2	Q6UX71	529 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	PACS1	Q6VY07	963 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	SMC5	Q8IY18	1101 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	PPHLN1	Q8NEY8	458 aa	Known RBP	3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	IL17RE	Q8NFR9	667 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	FGFBP3	Q8TAT2	258 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	CDK19	Q9BWU1	502 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	PAIP1	Q9H074	479 aa	Known RBP	3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	KIF9	Q9HAQ2	790 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	UBN1	Q9NPG3	1134 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	DLGAP2	Q9P1A6	1054 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	NAALADL1	Q9UQQ1	740 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	JRKL	Q9Y4A0	524 aa		3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	TMEM184B	Q9Y519	407 aa	Predicted RBP	3.04	□□□□□ -1.92
UBR1-209	ENST00000569243	KANSL1L	A0AUZ9	987 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	MEIOC	A2RUB1	952 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243		A6NL46	340 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	PRR32	B1ATL7	298 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	EIF3CL	B5ME19	914 aa	Known RBP	3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	JRK	O75564	520 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	TMEM63A	O94886	807 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	CLPTM1	O96005	669 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	TFAP2A	P05549	437 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	PYGL	P06737	847 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	CEACAM1	P13688	526 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	MSH3	P20585	1137 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	NR2F2	P24468	414 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	ITGA3	P26006	1051 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	BSG	P35613	385 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	RARS	P54136	660 aa	Known RBP	3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	OLR1	P78380	273 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	COG7	P83436	770 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	DCTN2	Q13561	401 aa	Known RBP	3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	TMEM187	Q14656	261 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	ADIPOQ	Q15848	244 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	DUOXA1	Q1HG43	343 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	CTU2	Q2VPK5	515 aa	Known RBP	3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	DPCR1	Q3MIW9	517 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	RAB6C	Q53S08	254 aa		3.03	□□□□□ -1.92
UBR1-209	ENST00000569243	ACAD10	Q6JQN1	1059 aa		3.03	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms