RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 NUDT18Q6ZVK8 323 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 CHMP1BQ7LBR1 199 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 TREML1Q86YW5 311 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SPATA2LQ8IUW3 424 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 NIPA2Q8N8Q9 360 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SMG7Q92540 1137 aaKnown RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 PHF21BQ96EK2 531 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SCRN2Q96FV2 425 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 DMRTB1Q96MA1 342 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 NPAS2Q99743 824 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 TM9SF2Q99805 663 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 MYNNQ9NPC7 610 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ZNRF3Q9ULT6 936 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 KRBA1A5PL33 1030 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 DCDC2CA8MYV0 355 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 CYP7B1O75881 506 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ALX3O95076 343 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 CHRNB1P11230 501 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 UGT2B10P36537 528 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 AVPR1AP37288 418 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ARCN1P48444 511 aaKnown RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ACOT2P49753 483 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 FLI1Q01543 452 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ESCO2Q56NI9 601 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 PIGGQ5H8A4 983 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 FAM198BQ6UWH4 519 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 XKR5Q6UX68 686 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 CREB3L2Q70SY1 520 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 RNF149Q8NC42 400 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 TXNDC15Q96J42 360 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 DPYSL5Q9BPU6 564 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 MROQ9BYG7 248 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 TLR8Q9NR97 1041 aaKnown RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 PAQR5Q9NXK6 330 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SIX4Q9UIU6 781 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 HCN2Q9UL51 889 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 CPS1P31327 1500 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 J3QRK9 145 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 AURKAO14965 403 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 LRRTM2O43300 516 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 UPK1BO75841 260 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 CNTN5O94779 1100 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 IFNW1P05000 195 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 S100A8P05109 93 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 IL3P08700 152 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ALDH4A1P30038 563 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SLC11A2P49281 568 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 UBXN2AP68543 259 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 NIPAL4Q0D2K0 466 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 MGAT5BQ3V5L5 792 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 EPGNQ6UW88 154 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 HSDL2Q6YN16 418 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 GMCL1P1Q8NEA9 526 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ELMO1Q92556 727 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 FBXL8Q96CD0 374 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 TRNT1Q96Q11 434 aaKnown RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 TPK1Q9H3S4 243 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 DDIT4Q9NX09 232 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 CKLFQ9UBR5 152 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SLC25A13Q9UJS0 675 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ERVW-1Q9UQF0 538 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 NUDT19A8MXV4 375 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SLC37A4O43826 429 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 RFPL3O75679 317 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 CCNB2O95067 398 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 RB1P06400 928 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 CYP3A5P20815 502 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 NTSP30990 170 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SLC12A3P55017 1021 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 YWHAZP63104 245 aaKnown RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 CYP2A13Q16696 494 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SGO1Q5FBB7 561 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF484Q5JVG2 852 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SLC22A10Q63ZE4 541 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 KLHL24Q6TFL4 600 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ARSKQ6UWY0 536 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 STRADAQ7RTN6 431 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 RBFAQ8N0V3 343 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.06□□□□□ -1.283e-15■■□□□ 12.3
CNOT1-216ENST00000569240 ANKRD49Q8WVL7 239 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 LENG9Q96B70 501 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 FNDC11Q9BVV2 318 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 GATA5Q9BWX5 397 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF436Q9C0F3 470 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 MAGIXQ9H6Y5 334 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SAGE1Q9NXZ1 904 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ZMAT5Q9UDW3 170 aaKnown RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 AFF4Q9UHB7 1163 aaKnown RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 CDH7Q9ULB5 785 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 FARSAQ9Y285 508 aaKnown RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 OAS3Q9Y6K5 1087 aaKnown RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 FAM170AA1A519 330 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 SNAP29O95721 258 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 RLN1P04808 185 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 HLA-EP13747 358 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 UQCRC1P31930 480 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 NOS2P35228 1153 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 CDH13P55290 713 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 MTMR2Q13614 643 aa7.05□□□□□ -1.28
CNOT1-216ENST00000569240 PUS10Q3MIT2 529 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms