RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 AMD1P17707 334 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 XRCC1P18887 633 aaPredicted RBP15.28■□□□□ 0.04
NME3-211ENST00000568561 ZBED6P86452 979 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 MC1RQ01726 317 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 PPIDQ08752 370 aaKnown RBP15.28■□□□□ 0.04
NME3-211ENST00000568561 AP1B1Q10567 949 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 UBAP2LQ14157 1087 aaKnown RBP15.28■□□□□ 0.04
NME3-211ENST00000568561 ERV3-1Q14264 604 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 C6orf15Q6UXA7 325 aaPredicted RBP15.28■□□□□ 0.04
NME3-211ENST00000568561 NPNTQ6UXI9 565 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 FAM92BQ6ZTR7 304 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 LUZP1Q86V48 1076 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 LRRTM4Q86VH4 590 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 ZNF547Q8IVP9 402 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 MAP7D3Q8IWC1 876 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 AGAP3Q96P47 875 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 ZSCAN5AQ9BUG6 496 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 TRIM39Q9HCM9 518 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 SPO11Q9Y5K1 396 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 KCNMB2Q9Y691 235 aa15.28■□□□□ 0.04
NME3-211ENST00000568561 NBPF19A0A087WUL8 3843 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 TEX15Q9BXT5 2789 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 LRRD1A4D1F6 860 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 AURKAO14965 403 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 CHUKO15111 745 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 KATNA1O75449 491 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 GYPCP04921 128 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 KRT7P08729 469 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 BPIP17213 487 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 KDELR1P24390 212 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 CAPZBP47756 277 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 CLCNKAP51800 687 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 PPP1CAP62136 330 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 SEPT6Q14141 434 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 GPR18Q14330 331 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 RASGRP3Q8IV61 690 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 TRAM1L1Q8N609 369 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 AVL9Q8NBF6 648 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 SPATA22Q8NHS9 363 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 STAMBPL1Q96FJ0 436 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 IMP4Q96G21 291 aaKnown RBP15.27■□□□□ 0.04
NME3-211ENST00000568561 RNF157Q96PX1 679 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 GPR63Q9BZJ6 419 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 ZNF768Q9H5H4 540 aaKnown RBP15.27■□□□□ 0.04
NME3-211ENST00000568561 UCK1Q9HA47 277 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 CBX8Q9HC52 389 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 BPIFA1Q9NP55 256 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 LNPEPQ9UIQ6 1025 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 TMPRSS11EQ9UL52 423 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 CAPN11Q9UMQ6 739 aa15.27■□□□□ 0.04
NME3-211ENST00000568561 CDC14CA4D256 554 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 KMOO15229 486 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 MTSS1O43312 755 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 NDUFA10O95299 355 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 MT-CYBP00156 380 aaPredicted RBP15.26■□□□□ 0.03
NME3-211ENST00000568561 UBASH3AP57075 661 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 DCDC1P59894 354 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 MAP7Q14244 749 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 MESDQ14696 234 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 NOMO1Q15155 1222 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 CACHD1Q5VU97 1274 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 IRGCQ6NXR0 463 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 TMC3Q7Z5M5 1100 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 CTNNBL1Q8WYA6 563 aaPredicted RBP15.26■□□□□ 0.03
NME3-211ENST00000568561 TIMM29Q9BSF4 260 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 UBP1Q9NZI7 540 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 UVRAGQ9P2Y5 699 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 NFKBIL1Q9UBC1 381 aaPredicted RBP15.26■□□□□ 0.03
NME3-211ENST00000568561 LUC7L2Q9Y383 392 aaKnown RBP15.26■□□□□ 0.03
NME3-211ENST00000568561 KCTD3Q9Y597 815 aa15.26■□□□□ 0.03
NME3-211ENST00000568561 GPR39O43194 453 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 PMPCBO75439 489 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 CDK14O94921 469 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 TIAF1O95411 115 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 CASP14P31944 242 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 MLLT10P55197 1068 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 DYNLT1P63172 113 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 CDK18Q07002 472 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 KCNAB1Q14722 419 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 CRTC2Q53ET0 693 aaPredicted RBP15.25■□□□□ 0.03
NME3-211ENST00000568561 NT5DC3Q86UY8 548 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 TRAPPC5Q8IUR0 188 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 GPR150Q8NGU9 434 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.25■□□□□ 0.03
NME3-211ENST00000568561 CXorf40BQ96DE9 158 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 RUFY1Q96T51 708 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 MAGEE1Q9HCI5 957 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 SLC40A1Q9NP59 571 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 POT1Q9NUX5 634 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 WDR37Q9Y2I8 494 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 PCDHB3Q9Y5E6 796 aa15.25■□□□□ 0.03
NME3-211ENST00000568561 CLEC18AA5D8T8 446 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 C3orf70A6NLC5 250 aaPredicted RBP15.24■□□□□ 0.03
NME3-211ENST00000568561 GPR89AB7ZAQ6 455 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 F5H423 210 aaPredicted RBP15.24■□□□□ 0.03
NME3-211ENST00000568561 APOL1O14791 398 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 SPAG6O75602 509 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 DNAJB5O75953 348 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 KRT1P04264 644 aa15.24■□□□□ 0.03
NME3-211ENST00000568561 H2AFZP0C0S5 128 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms