RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 TRIM5Q9C035 493 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 HSD3B7Q9H2F3 369 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 ACTL8Q9H568 366 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 TRIM39Q9HCM9 518 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 SLC40A1Q9NP59 571 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 CHKBQ9Y259 395 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 CSMD1Q96PZ7 3565 aa12.56□□□□□ -0.4
RNF40-208ENST00000565995 ANKRD66B4E2M5 251 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 CBFA2T2O43439 604 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 VIPP01282 170 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 RARAP10276 462 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 ZNF8P17098 575 aaPredicted RBP12.55□□□□□ -0.4
RNF40-208ENST00000565995 TYRP1P17643 537 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 AMD1P17707 334 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 LPOP22079 712 aaPredicted RBP12.55□□□□□ -0.4
RNF40-208ENST00000565995 VARSP26640 1264 aaKnown RBP12.55□□□□□ -0.4
RNF40-208ENST00000565995 PTPN4P29074 926 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 SEPHS1P49903 392 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 PGDP52209 483 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 EPHB1P54762 984 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 ANKRD20A8PQ5CZ79 823 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 AGAP9Q5VTM2 703 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 CACHD1Q5VU97 1274 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 APTXQ7Z2E3 356 aaKnown RBP12.55□□□□□ -0.4
RNF40-208ENST00000565995 SYVN1Q86TM6 617 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 ADAMTS17Q8TE56 1095 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 ZDHHC12Q96GR4 267 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 SLC41A2Q96JW4 573 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 TSGA13Q96PP4 275 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 SLC25A23Q9BV35 468 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 AKIRIN1Q9H9L7 192 aaPredicted RBP12.55□□□□□ -0.4
RNF40-208ENST00000565995 PCDH9Q9HC56 1237 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 PDE7BQ9NP56 450 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 IGSF5Q9NSI5 407 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 KLC4Q9NSK0 619 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 POT1Q9NUX5 634 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 PKD2L2Q9NZM6 624 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 IFNKQ9P0W0 207 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 RCOR3Q9P2K3 495 aaPredicted RBP12.55□□□□□ -0.4
RNF40-208ENST00000565995 NFKBIL1Q9UBC1 381 aaPredicted RBP12.55□□□□□ -0.4
RNF40-208ENST00000565995 SLC23A2Q9UGH3 650 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 SCINQ9Y6U3 715 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 PCSK5Q92824 1860 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 OTOGQ6ZRI0 2925 aa12.55□□□□□ -0.4
RNF40-208ENST00000565995 C1orf232A0A0U1RR37 186 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 TCP11X1B4DZS4 312 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 KMOO15229 486 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 MATN3O15232 486 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 KIF1CO43896 1103 aaKnown RBP12.54□□□□□ -0.4
RNF40-208ENST00000565995 TIAF1O95411 115 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 FTLP02792 175 aaPredicted RBP12.54□□□□□ -0.4
RNF40-208ENST00000565995 BRAFP15056 766 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 TCF4P15884 667 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 CA4P22748 312 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 CCNCP24863 283 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 CASP14P31944 242 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 UBASH3AP57075 661 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 DSC2Q02487 901 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 UBXN1Q04323 297 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 ITKQ08881 620 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 GALNT2Q10471 571 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 PAFAH1B3Q15102 231 aaKnown RBP12.54□□□□□ -0.4
RNF40-208ENST00000565995 INPP5JQ15735 1006 aaPredicted RBP12.54□□□□□ -0.4
RNF40-208ENST00000565995 PDPK2PQ6A1A2 396 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 PWWP2BQ6NUJ5 590 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 JMJD6Q6NYC1 403 aaPredicted RBP12.54□□□□□ -0.4
RNF40-208ENST00000565995 MAMDC2Q7Z304 686 aaPredicted RBP12.54□□□□□ -0.4
RNF40-208ENST00000565995 ADGRG6Q86SQ4 1221 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 Q8NA96 180 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 UBXN4Q92575 508 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 RSC1A1Q92681 617 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 EID2BQ96D98 161 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 PCMTD1Q96MG8 357 aaPredicted RBP12.54□□□□□ -0.4
RNF40-208ENST00000565995 TIMM29Q9BSF4 260 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 PCDH18Q9HCL0 1135 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 MRPL47Q9HD33 250 aaKnown RBP12.54□□□□□ -0.4
RNF40-208ENST00000565995 LNPEPQ9UIQ6 1025 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 ZNF451Q9Y4E5 1061 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 FBN2P35556 2912 aa12.54□□□□□ -0.4
RNF40-208ENST00000565995 SNRNP200O75643 2136 aaKnown RBP12.53□□□□□ -0.4
RNF40-208ENST00000565995 PDZD2O15018 2839 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 TMCO5BA8MYB1 307 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 RASSF9O75901 435 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 SLC25A14O95258 325 aaPredicted RBP12.53□□□□□ -0.4
RNF40-208ENST00000565995 CLDN1O95832 211 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 ZNF7P17097 686 aaPredicted RBP12.53□□□□□ -0.4
RNF40-208ENST00000565995 DCTP40126 519 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 DCDC1P59894 354 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 NIPAL4Q0D2K0 466 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 GPR18Q14330 331 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 CHRNA6Q15825 494 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 QPCTQ16769 361 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 SMTNL2Q2TAL5 461 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 IZUMO3Q5VZ72 239 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 TXNRD3NBQ6F5E7 133 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 TIGD7Q6NT04 549 aaPredicted RBP12.53□□□□□ -0.4
RNF40-208ENST00000565995 KMT5CQ86Y97 462 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 ZNF547Q8IVP9 402 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 NIPA2Q8N8Q9 360 aa12.53□□□□□ -0.4
RNF40-208ENST00000565995 CCHCR1Q8TD31 782 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms