RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 SEPT7Q16181 437 aaKnown RBP17.17■□□□□ 0.34
MAP1LC3B-207ENST00000565788 ATP13A5Q4VNC0 1218 aa17.17■□□□□ 0.34
MAP1LC3B-207ENST00000565788 SIRPB2Q5JXA9 342 aa17.17■□□□□ 0.34
MAP1LC3B-207ENST00000565788 C11orf63Q6NUN7 778 aa17.17■□□□□ 0.34
MAP1LC3B-207ENST00000565788 PID1Q7Z2X4 250 aa17.17■□□□□ 0.34
MAP1LC3B-207ENST00000565788 RCOR2Q8IZ40 523 aa17.17■□□□□ 0.34
MAP1LC3B-207ENST00000565788 HTR3CQ8WXA8 447 aa17.17■□□□□ 0.34
MAP1LC3B-207ENST00000565788 VPS35Q96QK1 796 aa17.17■□□□□ 0.34
MAP1LC3B-207ENST00000565788 TIMM29Q9BSF4 260 aa17.17■□□□□ 0.34
MAP1LC3B-207ENST00000565788 PIEZO2Q9H5I5 2752 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 PRR19A6NJB7 356 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 PDZK1P1A8MUH7 402 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 ZIC2O95409 532 aaPredicted RBP17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 XRCC1P18887 633 aaPredicted RBP17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 SLC19A1P41440 591 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 DCAF12Q5T6F0 453 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 BBS12Q6ZW61 710 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 CCDC170Q8IYT3 715 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 ZSCAN1Q8NBB4 408 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 AVL9Q8NBF6 648 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 IPMKQ8NFU5 416 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 RTP4Q96DX8 246 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 RBM41Q96IZ5 413 aaKnown RBP17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 VAT1Q99536 393 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 CTRCQ99895 268 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 HEMGNQ9BXL5 484 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 ASPSCR1Q9BZE9 553 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 EPB41L1Q9H4G0 881 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 TRABDQ9H4I3 376 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 C10orf88Q9H8K7 445 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 OGFRQ9NZT2 677 aa17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 ZNF624Q9P2J8 865 aaPredicted RBP17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 ZNF106Q9H2Y7 1883 aaKnown RBP17.16■□□□□ 0.34
MAP1LC3B-207ENST00000565788 HACD1B0YJ81 288 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 B8ZZF3 427 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 GPR39O43194 453 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 RAD1O60671 282 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 VIPP01282 170 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 EPOP01588 193 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 ITGB2P05107 769 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 BRAFP15056 766 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 RPL10P27635 214 aaKnown RBP17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 CA5AP35218 305 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 CYLC1P35663 651 aaPredicted RBP17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 SPAM1P38567 509 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 GFERP55789 205 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 MC2RQ01718 297 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 TMEM115Q12893 351 aaPredicted RBP17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 SPA17Q15506 151 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 SLC1A5Q15758 541 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 PPP2R5EQ16537 467 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 FAM151BQ6UXP7 276 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 TMEM26Q6ZUK4 368 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 GLT6D1Q7Z4J2 308 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 C11orf96Q7Z7L8 435 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 DAAM2Q86T65 1068 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 TRIM48Q8IWZ4 208 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 CACNA2D3Q8IZS8 1091 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 IL22RA1Q8N6P7 574 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 GDAP1Q8TB36 358 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 BLOC1S5Q8TDH9 187 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 ARHGAP9Q9BRR9 750 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 UCK1Q9HA47 277 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 APMAPQ9HDC9 416 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 IL26Q9NPH9 171 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 IL17CQ9P0M4 197 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 RSPH14Q9UHP6 348 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 SLC30A1Q9Y6M5 507 aa17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 MN1Q10571 1320 aaPredicted RBP17.15■□□□□ 0.34
MAP1LC3B-207ENST00000565788 RCCD1A6NED2 376 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 APOC4-APOC2K7ER74 178 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 BUD23O43709 281 aaKnown RBP17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 APOC2P02655 101 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 LIFP15018 202 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 TYRP1P17643 537 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 HLA-DPA1P20036 260 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 RBL1P28749 1068 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 TNNT3P45378 269 aaPredicted RBP17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 DRG2P55039 364 aaKnown RBP17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 MPP3Q13368 585 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 GTF2H3Q13889 308 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 CHRNA6Q15825 494 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 TBR1Q16650 682 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 ABRAXAS1Q6UWZ7 409 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 TRAPPC5Q8IUR0 188 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 TEFMQ96QE5 360 aaKnown RBP17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 SLC12A9Q9BXP2 914 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 HACD3Q9P035 362 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 TRIM10Q9UDY6 481 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 BSNQ9UPA5 3926 aa17.14■□□□□ 0.33
MAP1LC3B-207ENST00000565788 SOWAHDA6NJG2 315 aa17.13■□□□□ 0.33
MAP1LC3B-207ENST00000565788 OR52A4PA6NMU1 304 aa17.13■□□□□ 0.33
MAP1LC3B-207ENST00000565788 H7C0C1 242 aa17.13■□□□□ 0.33
MAP1LC3B-207ENST00000565788 GAPDHSO14556 408 aaPredicted RBP17.13■□□□□ 0.33
MAP1LC3B-207ENST00000565788 UGT1A9O60656 530 aa17.13■□□□□ 0.33
MAP1LC3B-207ENST00000565788 UBXN7O94888 489 aa17.13■□□□□ 0.33
MAP1LC3B-207ENST00000565788 FAM87AP0C7U9 286 aa17.13■□□□□ 0.33
MAP1LC3B-207ENST00000565788 UGT1A6P19224 532 aa17.13■□□□□ 0.33
MAP1LC3B-207ENST00000565788 UGT1A1P22309 533 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms