RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 KCTD19Q17RG1 926 aaPredicted RBP18.71■□□□□ 0.59
SPSB3-207ENST00000565550 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.71■□□□□ 0.59
SPSB3-207ENST00000565550 PRICKLE2Q7Z3G6 844 aa18.71■□□□□ 0.59
SPSB3-207ENST00000565550 TRIM58Q8NG06 486 aa18.71■□□□□ 0.59
SPSB3-207ENST00000565550 OR10G6Q8NH81 332 aa18.71■□□□□ 0.59
SPSB3-207ENST00000565550 GORASP1Q9BQQ3 440 aa18.71■□□□□ 0.59
SPSB3-207ENST00000565550 MLPHQ9BV36 600 aaPredicted RBP18.71■□□□□ 0.59
SPSB3-207ENST00000565550 FAM117AQ9C073 453 aa18.71■□□□□ 0.59
SPSB3-207ENST00000565550 FAM83DQ9H4H8 585 aa18.71■□□□□ 0.59
SPSB3-207ENST00000565550 TBC1D29Q9UFV1 150 aa18.71■□□□□ 0.59
SPSB3-207ENST00000565550 EFCAB7A8K855 629 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 A8MU76 341 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 ANKRD66B4E2M5 251 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 KCNN4O15554 427 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 FLNBO75369 2602 aaKnown RBP18.7■□□□□ 0.58
SPSB3-207ENST00000565550 PMPCBO75439 489 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 UGT1A3P35503 534 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 HHEXQ03014 270 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 NFATC2Q13469 925 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 SNAP47Q5SQN1 464 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 HENMT1Q5T8I9 393 aaKnown RBP18.7■□□□□ 0.58
SPSB3-207ENST00000565550 IYDQ6PHW0 289 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 DARS2Q6PI48 645 aaKnown RBP18.7■□□□□ 0.58
SPSB3-207ENST00000565550 PID1Q7Z2X4 250 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 FAM129CQ86XR2 697 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 SLC13A5Q86YT5 568 aaPredicted RBP18.7■□□□□ 0.58
SPSB3-207ENST00000565550 SLC35F6Q8N357 371 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 CCHCR1Q8TD31 782 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 TADA1Q96BN2 335 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 DDA1Q9BW61 102 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 SLC25A51Q9H1U9 297 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 STARD5Q9NSY2 213 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 PKD2L2Q9NZM6 624 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 PDP2Q9P2J9 529 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 KCNK6Q9Y257 313 aa18.7■□□□□ 0.58
SPSB3-207ENST00000565550 HEMK1Q9Y5R4 338 aaPredicted RBP18.7■□□□□ 0.58
SPSB3-207ENST00000565550 DUX1O43812 170 aa18.69■□□□□ 0.58
SPSB3-207ENST00000565550 SNX2O60749 519 aa18.69■□□□□ 0.58
SPSB3-207ENST00000565550 PIRTP0C851 137 aa18.69■□□□□ 0.58
SPSB3-207ENST00000565550 ACP5P13686 325 aa18.69■□□□□ 0.58
SPSB3-207ENST00000565550 GDF10P55107 478 aa18.69■□□□□ 0.58
SPSB3-207ENST00000565550 ZNF569Q5MCW4 686 aa18.69■□□□□ 0.58
SPSB3-207ENST00000565550 CDKL3Q8IVW4 592 aaPredicted RBP18.69■□□□□ 0.58
SPSB3-207ENST00000565550 IL22RA1Q8N6P7 574 aa18.69■□□□□ 0.58
SPSB3-207ENST00000565550 CCDC110Q8TBZ0 833 aa18.69■□□□□ 0.58
SPSB3-207ENST00000565550 C1orf54Q8WWF1 131 aa18.69■□□□□ 0.58
SPSB3-207ENST00000565550 OXNAD1Q96HP4 312 aaPredicted RBP18.69■□□□□ 0.58
SPSB3-207ENST00000565550 TRIB3Q96RU7 358 aa18.69■□□□□ 0.58
SPSB3-207ENST00000565550 SLC12A9Q9BXP2 914 aa18.69■□□□□ 0.58
SPSB3-207ENST00000565550 ASPSCR1Q9BZE9 553 aa18.69■□□□□ 0.58
SPSB3-207ENST00000565550 RMI1Q9H9A7 625 aa18.69■□□□□ 0.58
SPSB3-207ENST00000565550 SARS2Q9NP81 518 aaKnown RBP18.69■□□□□ 0.58
SPSB3-207ENST00000565550 SDK2Q58EX2 2172 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 RGSL1A5PLK6 1076 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 B4E171 279 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 SFTPCP11686 197 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 TSPAN7P41732 249 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 NFKB2Q00653 900 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 KCNC4Q03721 635 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 OLIG2Q13516 323 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 SIX1Q15475 284 aaPredicted RBP18.68■□□□□ 0.58
SPSB3-207ENST00000565550 DCAF12Q5T6F0 453 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 ANKS6Q68DC2 871 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 KDELC1Q6UW63 502 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 LYSMD3Q7Z3D4 306 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 CACNA2D3Q8IZS8 1091 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 BMPERQ8N8U9 685 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 SLC35B2Q8TB61 432 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 NCSTNQ92542 709 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 SH3KBP1Q96B97 665 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 EID2BQ96D98 161 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 ADGRE3Q9BY15 652 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 STN1Q9H668 368 aaKnown RBP18.68■□□□□ 0.58
SPSB3-207ENST00000565550 ARFGAP3Q9NP61 516 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 ATXN10Q9UBB4 475 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 RSPH14Q9UHP6 348 aa18.68■□□□□ 0.58
SPSB3-207ENST00000565550 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.68■□□□□ 0.58
SPSB3-207ENST00000565550 A6NCN8 305 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 GOLGA6L9A6NEM1 432 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 ZSCAN12O43309 604 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 GRID2O43424 1007 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 NUAK1O60285 661 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 RAD1O60671 282 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 WISP1O95388 367 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 LIFP15018 202 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 PSMB4P28070 264 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 RAB15P59190 212 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 SNX1Q13596 522 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 CLCA4Q14CN2 919 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 ANKRD20A2Q5SQ80 823 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 ZNF648Q5T619 568 aaPredicted RBP18.67■□□□□ 0.58
SPSB3-207ENST00000565550 ANKRD20A1Q5TYW2 823 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 ANKRD20A3Q5VUR7 823 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 WDR74Q6RFH5 385 aaPredicted RBP18.67■□□□□ 0.58
SPSB3-207ENST00000565550 ARHGAP22Q7Z5H3 698 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 PRUNE1Q86TP1 453 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 SLC9B2Q86UD5 537 aa18.67■□□□□ 0.58
SPSB3-207ENST00000565550 C17orf53Q8N3J3 647 aaPredicted RBP18.67■□□□□ 0.58
SPSB3-207ENST00000565550 TAB3Q8N5C8 712 aaPredicted RBP18.67■□□□□ 0.58
SPSB3-207ENST00000565550 MRGPRX2Q96LB1 330 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms