RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 LILRA5A6NI73 299 aa23.39■■□□□ 1.33
RAB40C-209ENST00000565511 J3QKU1 62 aa23.39■■□□□ 1.33
RAB40C-209ENST00000565511 RAD1O60671 282 aa23.39■■□□□ 1.33
RAB40C-209ENST00000565511 ITGB2P05107 769 aa23.39■■□□□ 1.33
RAB40C-209ENST00000565511 MC2RQ01718 297 aa23.39■■□□□ 1.33
RAB40C-209ENST00000565511 NFATC3Q12968 1075 aa23.39■■□□□ 1.33
RAB40C-209ENST00000565511 INSCQ1MX18 579 aa23.39■■□□□ 1.33
RAB40C-209ENST00000565511 PDPK2PQ6A1A2 396 aa23.39■■□□□ 1.33
RAB40C-209ENST00000565511 LRRTM4Q86VH4 590 aa23.39■■□□□ 1.33
RAB40C-209ENST00000565511 SLC25A41Q8N5S1 370 aa23.39■■□□□ 1.33
RAB40C-209ENST00000565511 QKIQ96PU8 341 aaKnown RBP eCLIP23.39■■□□□ 1.33
RAB40C-209ENST00000565511 GORASP1Q9BQQ3 440 aa23.39■■□□□ 1.33
RAB40C-209ENST00000565511 FAM153AQ9UHL3 310 aa23.39■■□□□ 1.33
RAB40C-209ENST00000565511 BUD23O43709 281 aaKnown RBP23.38■■□□□ 1.33
RAB40C-209ENST00000565511 MAGEA1P43355 309 aa23.38■■□□□ 1.33
RAB40C-209ENST00000565511 NR2C2P49116 596 aa23.38■■□□□ 1.33
RAB40C-209ENST00000565511 TFDP2Q14188 446 aa23.38■■□□□ 1.33
RAB40C-209ENST00000565511 ODF2Q5BJF6 829 aa23.38■■□□□ 1.33
RAB40C-209ENST00000565511 TIPARPQ7Z3E1 657 aaKnown RBP23.38■■□□□ 1.33
RAB40C-209ENST00000565511 KATNAL2Q8IYT4 538 aa23.38■■□□□ 1.33
RAB40C-209ENST00000565511 CACNA2D3Q8IZS8 1091 aa23.38■■□□□ 1.33
RAB40C-209ENST00000565511 CCDC112Q8NEF3 446 aa23.38■■□□□ 1.33
RAB40C-209ENST00000565511 SH3KBP1Q96B97 665 aa23.38■■□□□ 1.33
RAB40C-209ENST00000565511 STN1Q9H668 368 aaKnown RBP23.38■■□□□ 1.33
RAB40C-209ENST00000565511 IL26Q9NPH9 171 aa23.38■■□□□ 1.33
RAB40C-209ENST00000565511 SIDT1Q9NXL6 827 aaKnown RBP23.38■■□□□ 1.33
RAB40C-209ENST00000565511 PILRAQ9UKJ1 303 aa23.38■■□□□ 1.33
RAB40C-209ENST00000565511 OR52A4PA6NMU1 304 aa23.37■■□□□ 1.33
RAB40C-209ENST00000565511 GAPDHSO14556 408 aaPredicted RBP23.37■■□□□ 1.33
RAB40C-209ENST00000565511 LCA5LO95447 670 aa23.37■■□□□ 1.33
RAB40C-209ENST00000565511 SLC2A4P14672 509 aa23.37■■□□□ 1.33
RAB40C-209ENST00000565511 TYRP1P17643 537 aa23.37■■□□□ 1.33
RAB40C-209ENST00000565511 RPL10P27635 214 aaKnown RBP23.37■■□□□ 1.33
RAB40C-209ENST00000565511 ATP1A2P50993 1020 aa23.37■■□□□ 1.33
RAB40C-209ENST00000565511 DRG2P55039 364 aaKnown RBP23.37■■□□□ 1.33
RAB40C-209ENST00000565511 DCAF12Q5T6F0 453 aa23.37■■□□□ 1.33
RAB40C-209ENST00000565511 TMEM26Q6ZUK4 368 aa23.37■■□□□ 1.33
RAB40C-209ENST00000565511 VPS35Q96QK1 796 aa23.37■■□□□ 1.33
RAB40C-209ENST00000565511 TIMM29Q9BSF4 260 aa23.37■■□□□ 1.33
RAB40C-209ENST00000565511 RAD18Q9NS91 495 aa23.37■■□□□ 1.33
RAB40C-209ENST00000565511 KLHL8Q9P2G9 620 aaPredicted RBP23.37■■□□□ 1.33
RAB40C-209ENST00000565511 TRIM10Q9UDY6 481 aa23.37■■□□□ 1.33
RAB40C-209ENST00000565511 WDR37Q9Y2I8 494 aa23.37■■□□□ 1.33
RAB40C-209ENST00000565511 RCCD1A6NED2 376 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 OR5K4A6NMS3 321 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 PDZK1P1A8MUH7 402 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 GPR89AB7ZAQ6 455 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 KMOO15229 486 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 CDK14O94921 469 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 GPR89BP0CG08 455 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 XRCC1P18887 633 aaPredicted RBP23.36■■□□□ 1.33
RAB40C-209ENST00000565511 LEPRP48357 1165 aaKnown RBP23.36■■□□□ 1.33
RAB40C-209ENST00000565511 CTSCP53634 463 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 RAB15P59190 212 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 PTPRCAPQ14761 206 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 CHRNA6Q15825 494 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 TFDP3Q5H9I0 405 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 UNC5BQ8IZJ1 945 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 IL22RA1Q8N6P7 574 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 IPMKQ8NFU5 416 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 RSC1A1Q92681 617 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 FCRL5Q96RD9 977 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 HEMGNQ9BXL5 484 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 UCK1Q9HA47 277 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 IL17CQ9P0M4 197 aa23.36■■□□□ 1.33
RAB40C-209ENST00000565511 LOC101059948A0A1B0GTJ6 334 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 SLC28A2O43868 658 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 VEGFDO43915 354 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 UGT1A9O60656 530 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 C9P02748 559 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 UGT1A6P19224 532 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 UGT1A1P22309 533 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 UGT1A4P22310 534 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 HMGCLP35914 325 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 OLIG2Q13516 323 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 SARM1Q6SZW1 724 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 FAM151BQ6UXP7 276 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 ZSCAN1Q8NBB4 408 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 NAT14Q8WUY8 206 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 ARHGAP9Q9BRR9 750 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.35■■□□□ 1.33
RAB40C-209ENST00000565511 ASPSCR1Q9BZE9 553 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 UGT1A7Q9HAW7 530 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 UGT1A10Q9HAW8 530 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 UGT1A8Q9HAW9 530 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 STARD5Q9NSY2 213 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 PCDHA13Q9Y5I0 950 aa23.35■■□□□ 1.33
RAB40C-209ENST00000565511 TMEM115Q12893 351 aaPredicted RBP23.34■■□□□ 1.33
RAB40C-209ENST00000565511 SLC1A5Q15758 541 aa23.34■■□□□ 1.33
RAB40C-209ENST00000565511 CCDC70Q6NSX1 233 aa23.34■■□□□ 1.33
RAB40C-209ENST00000565511 C11orf63Q6NUN7 778 aa23.34■■□□□ 1.33
RAB40C-209ENST00000565511 ABRAXAS1Q6UWZ7 409 aa23.34■■□□□ 1.33
RAB40C-209ENST00000565511 FAM83HQ6ZRV2 1179 aaPredicted RBP23.34■■□□□ 1.33
RAB40C-209ENST00000565511 MICALCLQ6ZW33 695 aa23.34■■□□□ 1.33
RAB40C-209ENST00000565511 PID1Q7Z2X4 250 aa23.34■■□□□ 1.33
RAB40C-209ENST00000565511 TRAPPC5Q8IUR0 188 aa23.34■■□□□ 1.33
RAB40C-209ENST00000565511 CCDC50Q8IVM0 306 aa23.34■■□□□ 1.33
RAB40C-209ENST00000565511 RASGEF1AQ8N9B8 481 aa23.34■■□□□ 1.33
RAB40C-209ENST00000565511 GPR150Q8NGU9 434 aa23.34■■□□□ 1.33
RAB40C-209ENST00000565511 BLOC1S5Q8TDH9 187 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms