RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 MRFAP1Q9Y605 127 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 DNMT3AQ9Y6K1 912 aaPredicted RBP15.78■□□□□ 0.12
RAB40C-208ENST00000564703 CNOT1A5YKK6 2376 aaKnown RBP15.78■□□□□ 0.12
RAB40C-208ENST00000564703 SCN8AQ9UQD0 1980 aa15.78■□□□□ 0.12
RAB40C-208ENST00000564703 CPED1A4D0V7 1026 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 CTAGE15A4D2H0 777 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 F8W8V4 182 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 PFDN6O15212 129 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 GPR39O43194 453 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 RAD51CO43502 376 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 KCNJ13O60928 360 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 CTAGE8P0CG41 777 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 CDK4P11802 303 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 ATP1B2P14415 290 aaPredicted RBP15.77■□□□□ 0.12
RAB40C-208ENST00000564703 ZNF7P17097 686 aaPredicted RBP15.77■□□□□ 0.12
RAB40C-208ENST00000564703 AK4P27144 223 aaPredicted RBP15.77■□□□□ 0.12
RAB40C-208ENST00000564703 NMBRP28336 390 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 ARSDP51689 593 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 ITGA8P53708 1063 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 ACVR1Q04771 509 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 PROX2Q3B8N5 592 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 AARS2Q5JTZ9 985 aaKnown RBP15.77■□□□□ 0.12
RAB40C-208ENST00000564703 CTAGE6Q86UF2 777 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 CTAGE4Q8IX94 777 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 RASGEF1AQ8N9B8 481 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 BAHD1Q8TBE0 780 aaPredicted RBP15.77■□□□□ 0.12
RAB40C-208ENST00000564703 BOCQ9BWV1 1114 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 TAAR2Q9P1P5 351 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 PADI4Q9UM07 663 aa15.77■□□□□ 0.12
RAB40C-208ENST00000564703 GOLGA4Q13439 2230 aaKnown RBP15.77■□□□□ 0.12
RAB40C-208ENST00000564703 FAM237BA0A1B0GVD1 139 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 OR51F1A6NGY5 319 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 OR2AG2A6NM03 316 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 POP7O75817 140 aaKnown RBP15.76■□□□□ 0.11
RAB40C-208ENST00000564703 VAPBO95292 243 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 POLBP06746 335 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 CKMT1AP12532 417 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 SLC2A4P14672 509 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 ACRV1P26436 265 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 PMLP29590 882 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 CDKN1CP49918 316 aaPredicted RBP15.76■□□□□ 0.11
RAB40C-208ENST00000564703 ARL4CP56559 192 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 MRPS25P82663 173 aaKnown RBP15.76■□□□□ 0.11
RAB40C-208ENST00000564703 BBS9Q3SYG4 887 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 KHDC1Q4VXA5 237 aaKnown RBP15.76■□□□□ 0.11
RAB40C-208ENST00000564703 DNTTIP2Q5QJE6 756 aaKnown RBP15.76■□□□□ 0.11
RAB40C-208ENST00000564703 FNBP1LQ5T0N5 605 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 HIBCHQ6NVY1 386 aaPredicted RBP15.76■□□□□ 0.11
RAB40C-208ENST00000564703 C8orf74Q6P047 294 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 CES3Q6UWW8 571 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 DET1Q7L5Y6 550 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 SDCCAG8Q86SQ7 713 aaPredicted RBP15.76■□□□□ 0.11
RAB40C-208ENST00000564703 AMZ2Q86W34 360 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 NRROSQ86YC3 692 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 OTUD6BQ8N6M0 293 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 CEP112Q8N8E3 955 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 ARL10Q8N8L6 244 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 OR6C4Q8NGE1 309 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 ZDHHC1Q8WTX9 485 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 MFSD3Q96ES6 412 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 SGF29Q96ES7 293 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 STAMBPL1Q96FJ0 436 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 SGSM3Q96HU1 749 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 NAT9Q9BTE0 207 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 ABCG4Q9H172 646 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 DPH5Q9H2P9 285 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 OSGEPL1Q9H4B0 414 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 KLC4Q9NSK0 619 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 TREX1Q9NSU2 369 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 CATSPERZQ9NTU4 200 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 SPATS2LQ9NUQ6 558 aaKnown RBP15.76■□□□□ 0.11
RAB40C-208ENST00000564703 KCNK6Q9Y257 313 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 PLEKHM1Q9Y4G2 1056 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 SPTBN4Q9H254 2564 aa15.76■□□□□ 0.11
RAB40C-208ENST00000564703 LRP4O75096 1905 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 TRBV5-4A0A0C4DH59 114 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 KLHL33A6NCF5 533 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 B4DGG1 531 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 CD3EAPO15446 510 aaKnown RBP15.75■□□□□ 0.11
RAB40C-208ENST00000564703 ZW10O43264 779 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 SNX2O60749 519 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 SEC31AO94979 1220 aaKnown RBP15.75■□□□□ 0.11
RAB40C-208ENST00000564703 IDSP22304 550 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 ACP1P24666 158 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 CA5AP35218 305 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 RPL21P46778 160 aaKnown RBP15.75■□□□□ 0.11
RAB40C-208ENST00000564703 E2F1Q01094 437 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 DNAJC3Q13217 504 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 ILKQ13418 452 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 ITIH4Q14624 930 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 PLA2G4EQ3MJ16 856 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 ANKRD20A4Q4UJ75 823 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 MRNIPQ6NTE8 343 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 ZNF449Q6P9G9 518 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 OGFOD3Q6PK18 319 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 CCNJLQ8IV13 435 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 MPP5Q8N3R9 675 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 GABPB2Q8TAK5 448 aaPredicted RBP15.75■□□□□ 0.11
RAB40C-208ENST00000564703 NAT6Q93015 286 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 SIGLEC10Q96LC7 697 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms