RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	ANXA8L1	Q5VT79	327 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	CARM1	Q86X55	608 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	DNAJC10	Q8IXB1	793 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	NIPA2	Q8N8Q9	360 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	RFT1	Q96AA3	541 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	COPS4	Q9BT78	406 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	GMPR2	Q9P2T1	348 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SNX8	Q9Y5X2	465 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	NPHP4	O75161	1426 aa	Predicted RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	E2F3	O00716	465 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	LGR5	O75473	907 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	POLR2J	P52435	117 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	PTPRN	Q16849	979 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	STK40	Q8N2I9	435 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	TMEM132C	Q8N3T6	1108 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	FANCF	Q9NPI8	374 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SYNDIG1L	A6NDD5	238 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	RGS14	O43566	566 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	UQCRC1	P31930	480 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	SLC34A3	Q8N130	599 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	DENND6B	Q8NEG7	585 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	DPY30	Q9C005	99 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	NIF3L1	Q9GZT8	377 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	ZMYM5	Q9UJ78	669 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	SAMD4A	Q9UPU9	718 aa	Known RBP	4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	MRPS7	Q9Y2R9	242 aa	Known RBP	4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	ASB4	Q9Y574	426 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	SHPRH	Q149N8	1683 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	C1orf196	B1AJZ1	125 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	ZBTB24	O43167	697 aa	Predicted RBP	4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	TMEM62	Q0P6H9	643 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	PMF1	Q6P1K2	205 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	ZNF804B	A4D1E1	1349 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	ELOVL7	A1L3X0	281 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	SNN	O75324	88 aa	Predicted RBP	4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	BMP1	P13497	986 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	MAG	P20916	626 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	CPOX	P36551	454 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	CD79B	P40259	229 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	ARHGDIB	P52566	201 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	CTBP2	P56545	445 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	DEFA6	Q01524	100 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	CACNB1	Q02641	598 aa	Predicted RBP	4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	CDK5R2	Q13319	367 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	KRT33B	Q14525	404 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	IFNLR1	Q8IU57	520 aa	Predicted RBP	4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	NLGN1	Q8N2Q7	840 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	C12orf45	Q8N5I9	185 aa	Predicted RBP	4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	BPIFB1	Q8TDL5	484 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	ACD	Q96AP0	544 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	ZDHHC5	Q9C0B5	715 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	NTN4	Q9HB63	628 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	TAS2R13	Q9NYV9	303 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	TAS2R3	Q9NYW6	316 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	MUSK	O15146	869 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	ZNF37A	P17032	561 aa	Predicted RBP	4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	HTR1E	P28566	365 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	DCAF4L1	Q3SXM0	396 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	RANBP9	Q96S59	729 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	TMEM209	Q96SK2	561 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	MMP19	Q99542	508 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	BTBD16	Q32M84	506 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	ARHGAP36	Q6ZRI8	547 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	CPNE9	Q8IYJ1	553 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	RFK	Q969G6	155 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	DOK1	Q99704	481 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	IFT27	Q9BW83	186 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	CNTNAP4	Q9C0A0	1308 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	CDC7	O00311	574 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	XPNPEP2	O43895	674 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	SLC2A2	P11168	524 aa	Predicted RBP	4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	TAS1R2	Q8TE23	839 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	AHSP	Q9NZD4	102 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	ACSL1	P33121	698 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	NKAP	Q8N5F7	415 aa	Known RBP	4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	NSUN6	Q8TEA1	469 aa	Known RBP	4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	SAV1	Q9H4B6	383 aa	Predicted RBP	4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	ATP13A3	Q9H7F0	1226 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	TMEM161A	Q9NX61	479 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	RNF6	Q9Y252	685 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288		A0A075B6Q4	140 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288		M0R233	179 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	IFNA4	P05014	189 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	CDKN2B	P42772	138 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	RAB2A	P61019	212 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	FOXD4	Q12950	439 aa	Predicted RBP	4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	FAM124A	Q86V42	546 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	ZFAND1	Q8TCF1	268 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	RXFP2	Q8WXD0	754 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	SGK3	Q96BR1	496 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	HSFY1	Q96LI6	401 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	ZNF670	Q9BS34	389 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	RHOJ	Q9H4E5	214 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	MAGIX	Q9H6Y5	334 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	ARHGAP28	Q9P2N2	729 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	MINPP1	Q9UNW1	487 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	C5orf58	C9J3I9	102 aa		4.22	□□□□□ -1.73
MACF1-231	ENST00000564288	BCKDK	O14874	412 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms