RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 PDGFRAP16234 1089 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 RPL17P18621 184 aaKnown RBP10.98□□□□□ -0.65
TCF4-222ENST00000564228 NR4A1P22736 598 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 CRHBPP24387 322 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 CYP2F1P24903 491 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 ACADSBP45954 432 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 CCR10P46092 362 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 YAP1P46937 504 aaKnown RBP10.98□□□□□ -0.65
TCF4-222ENST00000564228 DNAJB13P59910 316 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 ECT2LQ008S8 904 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 FOXM1Q08050 763 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 TOP3AQ13472 1001 aaPredicted RBP10.98□□□□□ -0.65
TCF4-222ENST00000564228 RSPO2Q6UXX9 243 aaPredicted RBP10.98□□□□□ -0.65
TCF4-222ENST00000564228 SDR16C5Q8N3Y7 309 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 MINDY1Q8N5J2 469 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 LSM14AQ8ND56 463 aaKnown RBP10.98□□□□□ -0.65
TCF4-222ENST00000564228 ZMIZ2Q8NF64 920 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 ANGPTL6Q8NI99 470 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 FAM110BQ8TC76 370 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 SPPL2BQ8TCT7 592 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 ATL1Q8WXF7 558 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 RDH12Q96NR8 316 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 NEK6Q9HC98 313 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 NSMCE4AQ9NXX6 385 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 KLQ9UEF7 1012 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 ZNF229Q9UJW7 825 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 NAALAD2Q9Y3Q0 740 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 ANGPTL3Q9Y5C1 460 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 MYO9BQ13459 2157 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 MYO7AQ13402 2215 aa10.98□□□□□ -0.65
TCF4-222ENST00000564228 LCHNA4D1U4 455 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 FAM149AA5PLN7 773 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 SAGE2PA6NJ88 616 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 TTC34A8MYJ7 566 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 NME4O00746 187 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 AURKAO14965 403 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 SNPHO15079 494 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 IDH3BO43837 385 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 SNAP29O95721 258 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 LDLRP01130 860 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 SOD2P04179 222 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 DNAJB2P25686 324 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 HTR1BP28222 390 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 PPM1AP35813 382 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 GRIK1P39086 918 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 GLUD2P49448 558 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 PPP5CP53041 499 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 HIST2H2ACQ16777 129 aaPredicted RBP10.97□□□□□ -0.65
TCF4-222ENST00000564228 C9orf50Q5SZB4 431 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 SH3PXD2AQ5TCZ1 1133 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 TRNP1Q6NT89 227 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 TUBA3EQ6PEY2 450 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 CHST15Q7LFX5 561 aaPredicted RBP10.97□□□□□ -0.65
TCF4-222ENST00000564228 TAS2R42Q7RTR8 314 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 PRSS48Q7RTY5 328 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 GPRIN1Q7Z2K8 1008 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 PIWIL3Q7Z3Z3 882 aaKnown RBP10.97□□□□□ -0.65
TCF4-222ENST00000564228 THAP5Q7Z6K1 395 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 SCN4BQ8IWT1 228 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 HTR3CQ8WXA8 447 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 VPS33AQ96AX1 596 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 HSFY1Q96LI6 401 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 SNX18Q96RF0 628 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 RAD9AQ99638 391 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 GPR22Q99680 433 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 SNRNP25Q9BV90 132 aaKnown RBP10.97□□□□□ -0.65
TCF4-222ENST00000564228 ING2Q9H160 280 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 NPAP1Q9NZP6 1156 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 WARS2Q9UGM6 360 aaKnown RBP10.97□□□□□ -0.65
TCF4-222ENST00000564228 TLK1Q9UKI8 766 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 DGKBQ9Y6T7 804 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 RANBP2P49792 3224 aaKnown RBP10.97□□□□□ -0.65
TCF4-222ENST00000564228 EVPLLA8MZ36 301 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 HOXC11O43248 304 aaPredicted RBP10.97□□□□□ -0.65
TCF4-222ENST00000564228 ALX3O95076 343 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 EFEMP2O95967 443 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 MZF1P28698 734 aaPredicted RBP10.97□□□□□ -0.65
TCF4-222ENST00000564228 EIF2DP41214 584 aaKnown RBP10.97□□□□□ -0.65
TCF4-222ENST00000564228 CASP3P42574 277 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 POLD2P49005 469 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 NDUFV1P49821 464 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 TKTL1P51854 596 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 SLC6A3Q01959 620 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 GBE1Q04446 702 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 IFRD2Q12894 506 aaPredicted RBP10.97□□□□□ -0.65
TCF4-222ENST00000564228 DPYSL2Q16555 572 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 NFE2Q16621 373 aaPredicted RBP10.97□□□□□ -0.65
TCF4-222ENST00000564228 ZNF181Q2M3W8 571 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 TMEM135Q86UB9 458 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 TTC9BQ8N6N2 239 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 ATAD1Q8NBU5 361 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 PHOSPHO2Q8TCD6 241 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 NDRG1Q92597 394 aaKnown RBP10.97□□□□□ -0.65
TCF4-222ENST00000564228 FAM149B1Q96BN6 582 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 VPS39Q96JC1 886 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 FCRL3Q96P31 734 aaPredicted RBP10.97□□□□□ -0.65
TCF4-222ENST00000564228 TRIT1Q9H3H1 467 aaKnown RBP10.97□□□□□ -0.65
TCF4-222ENST00000564228 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.97□□□□□ -0.65
TCF4-222ENST00000564228 BAG5Q9UL15 447 aa10.97□□□□□ -0.65
TCF4-222ENST00000564228 NDUFAF1Q9Y375 327 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 285 ms