RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 BIRC7Q96CA5 298 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 MTBPQ96DY7 904 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 PGM2Q96G03 612 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 TEX101Q9BY14 249 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 CTNNAL1Q9UBT7 734 aa12.78□□□□□ -0.36
SPG7-209ENST00000564047 MBD1Q9UIS9 605 aaPredicted RBP12.78□□□□□ -0.36
SPG7-209ENST00000564047 CNOT6Q9ULM6 557 aaKnown RBP12.78□□□□□ -0.36
SPG7-209ENST00000564047 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.78□□□□□ -0.36
SPG7-209ENST00000564047 ZNF106Q9H2Y7 1883 aaKnown RBP12.78□□□□□ -0.36
SPG7-209ENST00000564047 METTL12A8MUP2 240 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 CFAP99D6REC4 459 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 PRMT5O14744 637 aaPredicted RBP12.77□□□□□ -0.37
SPG7-209ENST00000564047 FPGTO14772 594 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 RAD51BO15315 384 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 RGS16O15492 202 aaPredicted RBP12.77□□□□□ -0.37
SPG7-209ENST00000564047 SLC25A14O95258 325 aaPredicted RBP12.77□□□□□ -0.37
SPG7-209ENST00000564047 ESR1P03372 595 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 ITGA2BP08514 1039 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 SNRPAP09012 282 aaKnown RBP12.77□□□□□ -0.37
SPG7-209ENST00000564047 NR1D1P20393 614 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 AKT2P31751 481 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 IGFALSP35858 605 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 NSG1P42857 185 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 POLD2P49005 469 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 FNTBP49356 437 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 DNAJC3Q13217 504 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 INPP5AQ14642 412 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 ZNF528Q3MIS6 628 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 C11orf74Q86VG3 221 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 GDAP1Q8TB36 358 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 COX14Q96I36 57 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 HIC2Q96JB3 615 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 VPS39Q96JC1 886 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 GPR22Q99680 433 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 FAM126AQ9BYI3 521 aaPredicted RBP12.77□□□□□ -0.37
SPG7-209ENST00000564047 P2RY12Q9H244 342 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 TBK1Q9UHD2 729 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 INVSQ9Y283 1065 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 CRYL1Q9Y2S2 319 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 PCDHB1Q9Y5F3 818 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 HS3ST3A1Q9Y663 406 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 COMMD10Q9Y6G5 202 aa12.77□□□□□ -0.37
SPG7-209ENST00000564047 PLXNA2O75051 1894 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 CNOT1A5YKK6 2376 aaKnown RBP12.76□□□□□ -0.37
SPG7-209ENST00000564047 A0A1W2PPC4 97 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 UBA6A0AVT1 1052 aaPredicted RBP12.76□□□□□ -0.37
SPG7-209ENST00000564047 HMX2A2RU54 273 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 DCDC2BA2VCK2 349 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 PRAMEF26H0Y7S4 382 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 TOR1BO14657 336 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 INPP4BO15327 924 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 MAP3K13O43283 966 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 OR1I1O60431 355 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 F7P08709 466 aaPredicted RBP12.76□□□□□ -0.37
SPG7-209ENST00000564047 HOXC4P09017 264 aaPredicted RBP12.76□□□□□ -0.37
SPG7-209ENST00000564047 RALBP11234 206 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 PKMP14618 531 aaKnown RBP12.76□□□□□ -0.37
SPG7-209ENST00000564047 MSH3P20585 1137 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 ATP5DP30049 168 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 AKT1P31749 480 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 ABCG1P45844 678 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 HNRNPH2P55795 449 aaKnown RBP12.76□□□□□ -0.37
SPG7-209ENST00000564047 CDK3Q00526 305 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 RPL6Q02878 288 aaKnown RBP12.76□□□□□ -0.37
SPG7-209ENST00000564047 TMED2Q15363 201 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 TNFAIP8L3Q5GJ75 292 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 MROH9Q5TGP6 573 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 FAM45BPQ6NSW5 357 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 TIFABQ6ZNK6 161 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 HEATR4Q86WZ0 1026 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 CYP4X1Q8N118 509 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 TMEM145Q8NBT3 493 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 FAM45AQ8TCE6 357 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 MZB1Q8WU39 189 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 FOXJ1Q92949 421 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 DCUN1D1Q96GG9 259 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 BIRC8Q96P09 236 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 AARSD1Q9BTE6 412 aaKnown RBP12.76□□□□□ -0.37
SPG7-209ENST00000564047 BOCQ9BWV1 1114 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 ZCCHC2Q9C0B9 1178 aaKnown RBP12.76□□□□□ -0.37
SPG7-209ENST00000564047 CLPBQ9H078 707 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 STMN4Q9H169 189 aaPredicted RBP12.76□□□□□ -0.37
SPG7-209ENST00000564047 CCDC68Q9H2F9 335 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 WDR26Q9H7D7 661 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 EBF2Q9HAK2 575 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 TRIM39Q9HCM9 518 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 FZD3Q9NPG1 666 aa12.76□□□□□ -0.37
SPG7-209ENST00000564047 PHPT1Q9NRX4 125 aaPredicted RBP12.76□□□□□ -0.37
SPG7-209ENST00000564047 MTO1Q9Y2Z2 717 aaKnown RBP12.76□□□□□ -0.37
SPG7-209ENST00000564047 FAM95CA0A1B0GW59 222 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 TRIM49D1C9J1S8 452 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 F8W8V4 182 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 H3BMM5 538 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 QSOX1O00391 747 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 VEGFDO43915 354 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 AP2A2O94973 939 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 MYCLP1P12525 358 aaPredicted RBP12.75□□□□□ -0.37
SPG7-209ENST00000564047 ATP1B2P14415 290 aaPredicted RBP12.75□□□□□ -0.37
SPG7-209ENST00000564047 KRT15P19012 456 aa12.75□□□□□ -0.37
SPG7-209ENST00000564047 CD9P21926 228 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms