RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 IKBKBO14920 756 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 ASNA1O43681 348 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 VENTXO95231 258 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 GSRP00390 522 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 FYNP06241 537 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 UMODP07911 640 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 SLC2A4P14672 509 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 CDH4P55283 916 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 UBE2IP63279 158 aaKnown RBP10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 ABRQ12979 859 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 GPR19Q15760 415 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 SGSM1Q2NKQ1 1148 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 C5orf22Q49AR2 442 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 KAZNQ674X7 775 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 ARHGAP17Q68EM7 881 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 IRGCQ6NXR0 463 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 TMEM26Q6ZUK4 368 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 TAC4Q86UU9 113 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 DEPDC4Q8N2C3 294 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 C3orf56Q8N813 242 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 ATP6V0D2Q8N8Y2 350 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 C17orf62Q9BQA9 187 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 DNAI2Q9GZS0 605 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 PCDH12Q9NPG4 1184 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 LPAR3Q9UBY5 353 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 DNAJC16Q9Y2G8 782 aa10.36□□□□□ -0.75
HDGFL3-204ENST00000563790 SLC9B1P1A6NJY1 282 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 NPIPA5E9PKD4 350 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 GCNT3O95395 438 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 PRAMEF1O95521 474 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 CD160O95971 181 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 ASS1P00966 412 aaKnown RBP10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 CD63P08962 238 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 F3P13726 295 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 XPAP23025 273 aaPredicted RBP10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 SOX5P35711 763 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 SOX11P35716 441 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 PRPHP41219 470 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 COMPP49747 757 aaPredicted RBP10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 ARF5P84085 180 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 TNK1Q13470 666 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 AUHQ13825 339 aaKnown RBP10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 PYCR3Q53H96 274 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 PPP1R15BQ5SWA1 713 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 SMYD5Q6GMV2 418 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 SETD3Q86TU7 594 aaPredicted RBP10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 TMTC1Q8IUR5 882 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 SIAH3Q8IW03 269 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 C8orf76Q96K31 380 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 GSX2Q9BZM3 304 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 ACTR5Q9H9F9 607 aaPredicted RBP10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 BLOC1S4Q9NUP1 217 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 TMEM160Q9NX00 188 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 VANGL2Q9ULK5 521 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 NPIPA1Q9UND3 350 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 HRH3Q9Y5N1 445 aa10.35□□□□□ -0.75
HDGFL3-204ENST00000563790 CCDC66A2RUB6 948 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 OR5K4A6NMS3 321 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 CES2O00748 559 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 MATN4O95460 622 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 ADCY5O95622 1261 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 MYBL2P10244 700 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 CREB1P16220 341 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 GM2AP17900 193 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 AGXTP21549 392 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 NASPP49321 788 aaPredicted RBP10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 NEK4P51957 841 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 PPP1CAP62136 330 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 SNRPD1P62314 119 aaKnown RBP10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 HSD11B2P80365 405 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 CDK3Q00526 305 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 HSF1Q00613 529 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 ALDH6A1Q02252 535 aaKnown RBP10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 ALCAMQ13740 583 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 MCM6Q14566 821 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 UGP2Q16851 508 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 DTHD1Q6ZMT9 781 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 SUN3Q8TAQ9 357 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 FAM57AQ8TBR7 257 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 CALML4Q96GE6 196 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 TRIM7Q9C029 511 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 CYP3A43Q9HB55 503 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 SLC12A6Q9UHW9 1150 aa10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 NOCTQ9UK39 431 aaKnown RBP10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 MRPS2Q9Y399 296 aaKnown RBP10.34□□□□□ -0.75
HDGFL3-204ENST00000563790 ALPK2Q86TB3 2170 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 RYR2Q92736 4967 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 CXorf51AA0A1B0GTR3 108 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 CLCA1A8K7I4 914 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 MTA2O94776 668 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 MMP11P24347 488 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 GJB2P29033 226 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 ARL4DP49703 201 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 MLIPQ5VWP3 458 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 SPOPLQ6IQ16 392 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 B4GALNT4Q76KP1 1039 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 CD163Q86VB7 1156 aa10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.33□□□□□ -0.76
HDGFL3-204ENST00000563790 OR7D4Q8NG98 312 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms