RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 TRDMT1O14717 391 aaKnown RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 MAGEB3O15480 346 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 CLDN3O15551 220 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 KLHL41O60662 606 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 TBCAO75347 108 aaKnown RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 USP1O94782 785 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 MT-CO1P00395 513 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 MCF2P10911 925 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 M6PRP20645 277 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 NMT1P30419 496 aaKnown RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 MARCKSL1P49006 195 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 SERPINB9P50453 376 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 MXI1P50539 228 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 TMBIM6P55061 237 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 POU6F2P78424 691 aaPredicted RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 DSC2Q02487 901 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 PDIA2Q13087 525 aaKnown RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 PPIL2Q13356 520 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 PTK2BQ14289 1009 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 ZNF846Q147U1 533 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 OXA1LQ15070 435 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 TRIP13Q15645 432 aaPredicted RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 ASPRV1Q53RT3 343 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 RABGAP1LQ5R372 815 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 RNASEH2BQ5TBB1 312 aaKnown RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 FAXCQ5TGI0 409 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 LPCAT4Q643R3 524 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 ACAD10Q6JQN1 1059 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 C16orf87Q6PH81 154 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 CLEC4GQ6UXB4 293 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 TRIM72Q6ZMU5 477 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 TIFABQ6ZNK6 161 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 SH2D5Q6ZV89 423 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 AMIGO2Q86SJ2 522 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 PALB2Q86YC2 1186 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 MMAAQ8IVH4 418 aaKnown RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 FAM71AQ8IYT1 594 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 RCOR2Q8IZ40 523 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 C4orf33Q8N1A6 199 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 ACMSDQ8TDX5 336 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 NSUN6Q8TEA1 469 aaKnown RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 SCARB1Q8WTV0 552 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 SLC44A1Q8WWI5 657 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 DDB2Q92466 427 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 RFKQ969G6 155 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 COA7Q96BR5 231 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 ISOC1Q96CN7 298 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 RMND5BQ96G75 393 aaPredicted RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 FBXL20Q96IG2 436 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 C9orf72Q96LT7 481 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 PRPF18Q99633 342 aaKnown RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 OSBPL10Q9BXB5 764 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 RMND5AQ9H871 391 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 CPNE5Q9HCH3 593 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 ANKHQ9HCJ1 492 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 FBXO6Q9NRD1 293 aaPredicted RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 ARMC1Q9NVT9 282 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 NCKIPSDQ9NZQ3 722 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 ANKMY1Q9P2S6 941 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 NOCTQ9UK39 431 aaKnown RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 HEY1Q9Y5J3 304 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 ADGRA2Q96PE1 1338 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 LOXHD1Q8IVV2 1947 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 CAPN8A6NHC0 703 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 CCDC154A6NI56 674 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 H3BSA7 217 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 K7EPI3 171 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 COPEO14579 308 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 LIASO43766 372 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 ZC3H11AO75152 810 aaKnown RBP eCLIP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 MTRF1O75570 445 aaKnown RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 PROSCO94903 275 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 ZBTB11O95625 1053 aaPredicted RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 CHRM2P08172 466 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 HSPA8P11142 646 aaKnown RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 CPEP16870 476 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 NFKBIAP25963 317 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 GNL1P36915 607 aaPredicted RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 KCNJ1P48048 391 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 PSMD8P48556 350 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 NUMBP49757 651 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 HSD17B4P51659 736 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 MFAP3P55082 362 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 KRTAP10-9P60411 292 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 TFAP4Q01664 338 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 MECOMQ03112 1051 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 CDC20Q12834 499 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 NAB1Q13506 487 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 MTMR1Q13613 665 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 NR1D2Q14995 579 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 OASLQ15646 514 aaKnown RBP3.53□□□□□ -1.84
LINC01416-201ENST00000563553 TRIM16LQ309B1 348 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 EPC2Q52LR7 807 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 TSTD2Q5T7W7 516 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 KRT80Q6KB66 452 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 TTC30AQ86WT1 665 aa3.53□□□□□ -1.84
LINC01416-201ENST00000563553 LMO3Q8TAP4 145 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms