RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 TMEM198Q66K66 360 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 TMEM200BQ69YZ2 307 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 TAOK1Q7L7X3 1001 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 ATG9AQ7Z3C6 839 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 FOXP4Q8IVH2 680 aaPredicted RBP5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 FAM219AQ8IW50 185 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 NIPA2Q8N8Q9 360 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 RNF169Q8NCN4 708 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 TBC1D15Q8TC07 691 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 ST6GALNAC6Q969X2 333 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 CCDC51Q96ER9 411 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 TRMT61AQ96FX7 289 aaKnown RBP5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 PEX11GQ96HA9 241 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 KAZALD1Q96I82 304 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 PRICKLE1Q96MT3 831 aaPredicted RBP5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 SLC38A3Q99624 504 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 ZSCAN5AQ9BUG6 496 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 NFKBIZQ9BYH8 718 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 CRNKL1Q9BZJ0 848 aaKnown RBP5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 B3GNT4Q9C0J1 378 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 RAB33BQ9H082 229 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 SMOC2Q9H3U7 446 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 KIF9Q9HAQ2 790 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 RANGRFQ9HD47 186 aaPredicted RBP5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 MYOZ2Q9NPC6 264 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 SLC6A13Q9NSD5 602 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 PAG1Q9NWQ8 432 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 MTMR4Q9NYA4 1195 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 PSD3Q9NYI0 1048 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 PLK2Q9NYY3 685 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 VSX1Q9NZR4 365 aaPredicted RBP5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 Q9UFV3 132 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 MBD1Q9UIS9 605 aaPredicted RBP5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 ZFP69BQ9UJL9 534 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 FBXW11Q9UKB1 542 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 RCOR1Q9UKL0 485 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 ITGA11Q9UKX5 1188 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 CCPG1Q9ULG6 757 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 SNX6Q9UNH7 406 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 RAD54BQ9Y620 910 aa5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 COPG1Q9Y678 874 aaKnown RBP5.2□□□□□ -1.58
VPS35P1-201ENST00000563400 MYH3P11055 1940 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 KIF13BQ9NQT8 1826 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 GOLGA6L7A0A1B0GV03 622 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 C2orf78A6NCI8 922 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 C17orf100A8MU93 164 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 SLC30A4O14863 429 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 POLR3GO15318 223 aaPredicted RBP5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 WDR47O94967 919 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 NKX2-2O95096 273 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 CYP1A2P05177 515 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 CHRM4P08173 479 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 CYP3A4P08684 503 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 DBHP09172 617 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 ATXN1LP0C7T5 689 aaKnown RBP5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 CSF2RAP15509 400 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 VCLP18206 1134 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 LRPAP1P30533 357 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 GYG1P46976 350 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 CLK3P49761 638 aaKnown RBP5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 CDH13P55290 713 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 ACY1Q03154 408 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 TRDNQ13061 729 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 FGFBP1Q14512 234 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 EFTUD2Q15029 972 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 HERC4Q5GLZ8 1057 aaPredicted RBP5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 TEX35Q5T0J7 233 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 AADACL4Q5VUY2 407 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 ATG9BQ674R7 924 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 NOTUMQ6P988 496 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 GALNT18Q6P9A2 607 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 PSRC1Q6PGN9 363 aaPredicted RBP5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 MPZL3Q6UWV2 235 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 CES3Q6UWW8 571 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 WDR88Q6ZMY6 472 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 MOB3CQ70IA8 216 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 TADA2BQ86TJ2 420 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 VASH2Q86V25 355 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 CAND1Q86VP6 1230 aaKnown RBP5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 WDR5BQ86VZ2 330 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 FAM126BQ8IXS8 530 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 ZNF679Q8IYX0 411 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 DTX3Q8N9I9 347 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 PSD4Q8NDX1 1056 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 EXOC6Q8TAG9 804 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 NSMCE1Q8WV22 266 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 RAPGEF5Q92565 580 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 DNASE1L2Q92874 299 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 SLAMF9Q96A28 289 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 MIB2Q96AX9 1013 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 TTC25Q96NG3 672 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 SYT3Q9BQG1 590 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 KRTAP9-2Q9BYQ4 174 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 ERAP1Q9NZ08 941 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 CTNNAL1Q9UBT7 734 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 TRMT6Q9UJA5 497 aaKnown RBP5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 TMEM59LQ9UK28 342 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 NUDT5Q9UKK9 219 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 PSME2Q9UL46 239 aa5.19□□□□□ -1.58
VPS35P1-201ENST00000563400 NDRG4Q9ULP0 352 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms