RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 CCDC89Q8N998 374 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 OR52K1Q8NGK4 314 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 DNAJC1Q96KC8 554 aaKnown RBP27.88■■■□□ 2.05
NME3-203ENST00000563367 TIMM29Q9BSF4 260 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 OSGEPL1Q9H4B0 414 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 ASB8Q9H765 288 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 POLR1BQ9H9Y6 1135 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 RAB6BQ9NRW1 208 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 TRMT1Q9NXH9 659 aaKnown RBP27.88■■■□□ 2.05
NME3-203ENST00000563367 DNAJC16Q9Y2G8 782 aa27.88■■■□□ 2.05
NME3-203ENST00000563367 ACTN2P35609 894 aa27.87■■■□□ 2.05
NME3-203ENST00000563367 GRIA1P42261 906 aa27.87■■■□□ 2.05
NME3-203ENST00000563367 GPR3P46089 330 aa27.87■■■□□ 2.05
NME3-203ENST00000563367 KCNJ1P48048 391 aa27.87■■■□□ 2.05
NME3-203ENST00000563367 LSSP48449 732 aa27.87■■■□□ 2.05
NME3-203ENST00000563367 CTSCP53634 463 aa27.87■■■□□ 2.05
NME3-203ENST00000563367 NFATC2Q13469 925 aa27.87■■■□□ 2.05
NME3-203ENST00000563367 GTF2H3Q13889 308 aa27.87■■■□□ 2.05
NME3-203ENST00000563367 KCTD19Q17RG1 926 aaPredicted RBP27.87■■■□□ 2.05
NME3-203ENST00000563367 C3orf38Q5JPI3 329 aa27.87■■■□□ 2.05
NME3-203ENST00000563367 CHCHD2P9Q5T1J5 151 aaPredicted RBP27.87■■■□□ 2.05
NME3-203ENST00000563367 ZNF761Q86XN6 746 aaPredicted RBP27.87■■■□□ 2.05
NME3-203ENST00000563367 TTC25Q96NG3 672 aa27.87■■■□□ 2.05
NME3-203ENST00000563367 C19orf43Q9BQ61 176 aa27.87■■■□□ 2.05
NME3-203ENST00000563367 FAM96AQ9H5X1 160 aa27.87■■■□□ 2.05
NME3-203ENST00000563367 PKD1L2Q7Z442 2459 aa27.86■■■□□ 2.05
NME3-203ENST00000563367 ERI2A8K979 691 aaKnown RBP27.86■■■□□ 2.05
NME3-203ENST00000563367 AGAP14A8MT82 685 aa27.86■■■□□ 2.05
NME3-203ENST00000563367 ZSCAN12O43309 604 aa27.86■■■□□ 2.05
NME3-203ENST00000563367 TLX3O43711 291 aaPredicted RBP27.86■■■□□ 2.05
NME3-203ENST00000563367 SUN1O94901 812 aa27.86■■■□□ 2.05
NME3-203ENST00000563367 CD1CP29017 333 aa27.86■■■□□ 2.05
NME3-203ENST00000563367 SEMA5AQ13591 1074 aa27.86■■■□□ 2.05
NME3-203ENST00000563367 SEPT6Q14141 434 aa27.86■■■□□ 2.05
NME3-203ENST00000563367 USP53Q70EK8 1073 aa27.86■■■□□ 2.05
NME3-203ENST00000563367 LINC00523Q86TU6 105 aa27.86■■■□□ 2.05
NME3-203ENST00000563367 SLC35F6Q8N357 371 aa27.86■■■□□ 2.05
NME3-203ENST00000563367 PRELID2Q8N945 189 aa27.86■■■□□ 2.05
NME3-203ENST00000563367 PRR11Q96HE9 360 aaPredicted RBP27.86■■■□□ 2.05
NME3-203ENST00000563367 MS4A14Q96JA4 679 aa27.86■■■□□ 2.05
NME3-203ENST00000563367 RDH14Q9HBH5 336 aa27.86■■■□□ 2.05
NME3-203ENST00000563367 SCHIP1Q9P0W5 487 aaPredicted RBP27.86■■■□□ 2.05
NME3-203ENST00000563367 PAK5Q9P286 719 aa27.86■■■□□ 2.05
NME3-203ENST00000563367 PIKFYVEQ9Y2I7 2098 aa27.86■■■□□ 2.05
NME3-203ENST00000563367 DSPP15924 2871 aaKnown RBP27.86■■■□□ 2.05
NME3-203ENST00000563367 HADHAP40939 763 aa27.85■■■□□ 2.05
NME3-203ENST00000563367 INHBCP55103 352 aa27.85■■■□□ 2.05
NME3-203ENST00000563367 ZFP36L1Q07352 338 aaKnown RBP27.85■■■□□ 2.05
NME3-203ENST00000563367 NKAIN2Q5VXU1 208 aa27.85■■■□□ 2.05
NME3-203ENST00000563367 TMEM220Q6QAJ8 160 aa27.85■■■□□ 2.05
NME3-203ENST00000563367 NAT14Q8WUY8 206 aa27.85■■■□□ 2.05
NME3-203ENST00000563367 ANP32BQ92688 251 aaKnown RBP27.85■■■□□ 2.05
NME3-203ENST00000563367 CCDC97Q96F63 343 aaPredicted RBP27.85■■■□□ 2.05
NME3-203ENST00000563367 ZCCHC2Q9C0B9 1178 aaKnown RBP27.85■■■□□ 2.05
NME3-203ENST00000563367 EPB41L5Q9HCM4 733 aa27.85■■■□□ 2.05
NME3-203ENST00000563367 NLE1Q9NVX2 485 aaPredicted RBP27.85■■■□□ 2.05
NME3-203ENST00000563367 LAMA5O15230 3695 aa27.85■■■□□ 2.05
NME3-203ENST00000563367 IGHV1OR21-1A0A087WYE8 117 aa27.84■■■□□ 2.05
NME3-203ENST00000563367 OR2AG2A6NM03 316 aa27.84■■■□□ 2.05
NME3-203ENST00000563367 E7EVH7 732 aa27.84■■■□□ 2.05
NME3-203ENST00000563367 AKT1P31749 480 aa27.84■■■□□ 2.05
NME3-203ENST00000563367 CCKBRP32239 447 aa27.84■■■□□ 2.05
NME3-203ENST00000563367 LMAN1P49257 510 aa27.84■■■□□ 2.05
NME3-203ENST00000563367 HHEXQ03014 270 aa27.84■■■□□ 2.05
NME3-203ENST00000563367 DET1Q7L5Y6 550 aa27.84■■■□□ 2.05
NME3-203ENST00000563367 SLITRK4Q8IW52 837 aa27.84■■■□□ 2.05
NME3-203ENST00000563367 RASGEF1CQ8N431 466 aa27.84■■■□□ 2.05
NME3-203ENST00000563367 LIN37Q96GY3 246 aaPredicted RBP27.84■■■□□ 2.05
NME3-203ENST00000563367 TMEM74Q96NL1 305 aa27.84■■■□□ 2.05
NME3-203ENST00000563367 NUDT22Q9BRQ3 303 aa27.84■■■□□ 2.05
NME3-203ENST00000563367 SEMA6CQ9H3T2 930 aa27.84■■■□□ 2.05
NME3-203ENST00000563367 SARS2Q9NP81 518 aaKnown RBP27.84■■■□□ 2.05
NME3-203ENST00000563367 CCDC187A0A096LP49 1063 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 KIR2DS5A0A0G2JLQ3 304 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 A0A0G2JNG1 304 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 CCDC78A2IDD5 438 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 MROH6A6NGR9 719 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 KIR2DS3K7RE56 304 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 POP7O75817 140 aaKnown RBP27.83■■■□□ 2.05
NME3-203ENST00000563367 DXOO77932 396 aaKnown RBP27.83■■■□□ 2.05
NME3-203ENST00000563367 CPNE6O95741 557 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 SLC2A4P14672 509 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 MSH3P20585 1137 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 MC4RP32245 332 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 CDKN1CP49918 316 aaPredicted RBP27.83■■■□□ 2.05
NME3-203ENST00000563367 CFHR1Q03591 330 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 CDH17Q12864 832 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 KIR2DS5Q14953 304 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 SEPT7Q16181 437 aaKnown RBP27.83■■■□□ 2.05
NME3-203ENST00000563367 TBC1D25Q3MII6 688 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 MAP9Q49MG5 647 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 CCDC38Q502W7 563 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 ZNF574Q6ZN55 896 aaPredicted RBP27.83■■■□□ 2.05
NME3-203ENST00000563367 SNX20Q7Z614 316 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 SLC9B2Q86UD5 537 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 DNAAF3Q8N9W5 541 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 WDR36Q8NI36 951 aaKnown RBP27.83■■■□□ 2.05
NME3-203ENST00000563367 STYXQ8WUJ0 223 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 SGF29Q96ES7 293 aa27.83■■■□□ 2.05
NME3-203ENST00000563367 PBKQ96KB5 322 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms