RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 FAM198BQ6UWH4 519 aa7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 FMR1NBQ8N0W7 255 aaPredicted RBP7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 D2HGDHQ8N465 521 aa7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 AOPEPQ8N6M6 819 aa7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 SIDT2Q8NBJ9 832 aaKnown RBP7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 EXD1Q8NHP7 514 aa7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 FAR1Q8WVX9 515 aa7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 PIH1D2Q8WWB5 315 aa7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 CPA5Q8WXQ8 436 aa7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 ZNF501Q96CX3 271 aaPredicted RBP7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 SGSM3Q96HU1 749 aa7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 SLX1AQ9BQ83 275 aa7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 RIOK2Q9BVS4 552 aaKnown RBP7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 RMI1Q9H9A7 625 aa7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 DNAJC12Q9UKB3 198 aa7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 FZD10Q9ULW2 581 aa7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 NOVA2Q9UNW9 492 aaKnown RBP7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 ACANP16112 2415 aa7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 CPAMD8Q8IZJ3 1885 aa7.58□□□□□ -1.2
HERPUD1-206ENST00000563343 GTPBP10A4D1E9 387 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 ARHGAP42A6NI28 874 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 C19orf84I3L1E1 186 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 MEN1O00255 615 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 GPR37O15354 613 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 FGF10O15520 208 aaPredicted RBP7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 CREB3O43889 395 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 NUAK1O60285 661 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 FZD6O60353 706 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 SCRG1O75711 98 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 PGLSO95336 258 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 ASMTLO95671 621 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 LSM8O95777 96 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 VIPP01282 170 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 PYGLP06737 847 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 MMEP08473 750 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 PDHA1P08559 390 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 COX6B1P14854 86 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 CTPS1P17812 591 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 CAPN3P20807 821 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 MMP8P22894 467 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 RFC1P35251 1148 aaPredicted RBP7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 TDGF1P3P51864 188 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 STC1P52823 247 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 GSCP56915 257 aaPredicted RBP7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 SOX8P57073 446 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 PDE1BQ01064 536 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 ACY1Q03154 408 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 IL10RBQ08334 325 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 PTP4A2Q12974 167 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 ABRQ12979 859 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 PAK1Q13153 545 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 GPR18Q14330 331 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 IHHQ14623 411 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 EXOC3L4Q17RC7 722 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 ZNF789Q5FWF6 425 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 TAF3Q5VWG9 929 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 NAA35Q5VZE5 725 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 HGSNATQ68CP4 663 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 ISM2Q6H9L7 571 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 KLHL10Q6JEL2 608 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 IRGCQ6NXR0 463 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 ABRAXAS1Q6UWZ7 409 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 GBP6Q6ZN66 633 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 NOP9Q86U38 636 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 CDH24Q86UP0 819 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 NXPE1Q8N323 547 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 NPWQ8N729 165 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 PAF1Q8N7H5 531 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 NELFBQ8WX92 580 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 UBXN4Q92575 508 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 WNT2BQ93097 391 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 KCTD12Q96CX2 325 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 ZDHHC12Q96GR4 267 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 PCMTD1Q96MG8 357 aaPredicted RBP7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 NUDCD1Q96RS6 583 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 MAP3K3Q99759 626 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 MLPHQ9BV36 600 aaPredicted RBP7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 TMUB1Q9BVT8 246 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 NOD2Q9HC29 1040 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 SLC40A1Q9NP59 571 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 CHST11Q9NPF2 352 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 POT1Q9NUX5 634 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 SLC23A2Q9UGH3 650 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 SIK3Q9Y2K2 1263 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 HCFC1P51610 2035 aa7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 PRRC2AP48634 2157 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-206ENST00000563343 A0A1W2PQJ5 194 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 MASP2O00187 686 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 CCP110O43303 1012 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 GRID2O43424 1007 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 SNRNP200O75643 2136 aaKnown RBP7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 KLF7O75840 302 aaPredicted RBP7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 CYP1A1P04798 512 aaPredicted RBP7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 ZNF8P17098 575 aaPredicted RBP7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 GPD1P21695 349 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 SSTR2P30874 369 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 PPP1R2P41236 205 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 TSFMP43897 325 aaKnown RBP7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 RENBPP51606 427 aa7.56□□□□□ -1.2
HERPUD1-206ENST00000563343 STX17P56962 302 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms