RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 MTHFD2P13995 350 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 RPA2P15927 270 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 SRMP19623 302 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 MYF6P23409 242 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 CMA1P23946 247 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 CD40P25942 277 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 GNG10P50151 68 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 SLC6A3Q01959 620 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 FADDQ13158 208 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 PPIGQ13427 754 aaKnown RBP eCLIP4.74□□□□□ -1.652e-6■■□□□ 13.5
SMG1-207ENST00000563235 DYRK1AQ13627 763 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 UBAP2LQ14157 1087 aaKnown RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 KCNJ12Q14500 433 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 ARHGAP44Q17R89 818 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 CDONQ4KMG0 1287 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 LRRC38Q5VT99 294 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 ZNF425Q6IV72 752 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 CCDC137Q6PK04 289 aaKnown RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 LRRC70Q7Z2Q7 622 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 C12orf40Q86WS4 652 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 RHOT1Q8IXI2 618 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 GPR137CQ8N3F9 429 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 PLD5Q8N7P1 536 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 HEXDCQ8WVB3 486 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 TSEN15Q8WW01 171 aaKnown RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 C14orf79Q96F83 325 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 CCDC140Q96MF4 163 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 KCNS3Q9BQ31 491 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 C17orf80Q9BSJ5 609 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 GOLPH3LQ9H4A5 285 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 RIOX1Q9H6W3 641 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 SLC40A1Q9NP59 571 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 DNAJC17Q9NVM6 304 aaKnown RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 RUVBL2Q9Y230 463 aaKnown RBP4.74□□□□□ -1.65
SMG1-207ENST00000563235 NCKAP1Q9Y2A7 1128 aa4.74□□□□□ -1.65
SMG1-207ENST00000563235 DCCP43146 1447 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 BTBD19C9JJ37 291 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 TSPAN4O14817 238 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CHADO15335 359 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 EIF3HO15372 352 aaKnown RBP eCLIP4.73□□□□□ -1.657e-8■■■■□ 26.3
SMG1-207ENST00000563235 DCXO43602 365 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 BUB1BO60566 1050 aaPredicted RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 CABYRO75952 493 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CELF2O95319 508 aaKnown RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 TFRCP02786 760 aaKnown RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 C8orf89P0DMQ9 161 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CALCBP10092 127 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 SRCP12931 536 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CYP4B1P13584 511 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ADRA2CP18825 462 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 POLR2EP19388 210 aaKnown RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 CYP24A1Q07973 514 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 PCDH1Q08174 1060 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ART3Q13508 389 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 GRAPQ13588 217 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 TP53BP2Q13625 1128 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ADRM1Q16186 407 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 P3H1Q32P28 736 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 PABPC1LQ4VXU2 614 aaKnown RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 IFI44LQ53G44 452 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 XKR4Q5GH76 650 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ZNF468Q5VIY5 522 aaPredicted RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 SLC25A25Q6KCM7 469 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 TTC27Q6P3X3 843 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 BRAT1Q6PJG6 821 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ADCK2Q7Z695 626 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ZNF410Q86VK4 478 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 FIBCD1Q8N539 461 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 DAGLBQ8NCG7 672 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 NDNFQ8TB73 568 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ELMO3Q96BJ8 720 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 FAM227BQ96M60 508 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CALN1Q9BXU9 219 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 OPN3Q9H1Y3 402 aaPredicted RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 CDT1Q9H211 546 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ZSCAN16Q9H4T2 348 aaPredicted RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 ZDHHC4Q9NPG8 344 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 STOML1Q9UBI4 398 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 LCMT1Q9UIC8 334 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 MID2Q9UJV3 735 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 NFE2L3Q9Y4A8 694 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ASTN2O75129 1339 aaPredicted RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 A0A0U1RQJ8 604 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 LOC390937A0A1W2PQ73 354 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 TRPC5OSA6NMA1 111 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 H7C1Q1 480 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 PYCARD-AS1I3L0S3 204 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 TLR4O00206 839 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 HGSO14964 777 aaPredicted RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 BCAT2O15382 392 aaPredicted RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 KLK8O60259 260 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 TBX19O60806 448 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 RPS6KA4O75676 772 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CHRM2P08172 466 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ELNP15502 786 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 S100A1P23297 94 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 MST1P26927 711 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 HTR7P34969 479 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 SLC1A6P48664 564 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ATP11AP98196 1134 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms