RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 SNF8Q96H20 258 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 OLFM3Q96PB7 478 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 QKIQ96PU8 341 aaKnown RBP eCLIP13.27□□□□□ -0.29
SPG7-207ENST00000563218 SLC12A9Q9BXP2 914 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 TEX101Q9BY14 249 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 C10orf88Q9H8K7 445 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 ARFGAP3Q9NP61 516 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 SEPT10Q9P0V9 454 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 CD84Q9UIB8 345 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 NFU1Q9UMS0 254 aa13.27□□□□□ -0.29
SPG7-207ENST00000563218 GOLGA6CA6NDK9 693 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 GOLGA6BA6NDN3 693 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 NPIPB15A6NHN6 443 aaPredicted RBP13.26□□□□□ -0.29
SPG7-207ENST00000563218 RHPN2P1A8MT19 583 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 NDC80O14777 642 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 PPM1DO15297 605 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 KCNN4O15554 427 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 HTRA2O43464 458 aaPredicted RBP13.26□□□□□ -0.29
SPG7-207ENST00000563218 PEX11BO96011 259 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 SOD1P00441 154 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 CPP00450 1065 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 GOLGA6DP0CG33 693 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 LIFP15018 202 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 MX2P20592 715 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 KELP23276 732 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 RBL1P28749 1068 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 VIPR1P32241 457 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 MAXP61244 160 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 CDK3Q00526 305 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 CTBSQ01459 385 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 IL10RBQ08334 325 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 TRAF2Q12933 501 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 LBRQ14739 615 aaKnown RBP13.26□□□□□ -0.29
SPG7-207ENST00000563218 TRADDQ15628 312 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 KCTD19Q17RG1 926 aaPredicted RBP13.26□□□□□ -0.29
SPG7-207ENST00000563218 DOK6Q6PKX4 331 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 ATG14Q6ZNE5 492 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 B4GALNT4Q76KP1 1039 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 GSPT2Q8IYD1 628 aaKnown RBP13.26□□□□□ -0.29
SPG7-207ENST00000563218 FAM71DQ8N9W8 422 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 CCNYQ8ND76 341 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 NKD1Q969G9 470 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 TMEM159Q96B96 161 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 LRRC45Q96CN5 670 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 DTD2Q96FN9 168 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 FAM129AQ9BZQ8 928 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 BRD8Q9H0E9 1235 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 OCIAD1Q9NX40 245 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 GOLGA6AQ9NYA3 693 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 WHRNQ9P202 907 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 PCYT1BQ9Y5K3 369 aaPredicted RBP13.26□□□□□ -0.29
SPG7-207ENST00000563218 B3GALT1Q9Y5Z6 326 aa13.26□□□□□ -0.29
SPG7-207ENST00000563218 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.25□□□□□ -0.29
SPG7-207ENST00000563218 STMND1H3BQB6 276 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 STK10O94804 968 aaKnown RBP13.25□□□□□ -0.29
SPG7-207ENST00000563218 EML2O95834 649 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 ZSCAN5DPP0CG00 497 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 MYBL2P10244 700 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 ETS1P14921 441 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 CTPS1P17812 591 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 CR2P20023 1033 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 LIMK2P53671 638 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 GDF10P55107 478 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 AP1S1P61966 158 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 CAV1Q03135 178 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 TLE1Q04724 770 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 SRSF1Q07955 248 aaKnown RBP eCLIP13.25□□□□□ -0.29
SPG7-207ENST00000563218 NSUN2Q08J23 767 aaKnown RBP eCLIP13.25□□□□□ -0.29
SPG7-207ENST00000563218 GALNT2Q10471 571 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 AP1B1Q10567 949 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 GPS1Q13098 491 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 COLEC12Q5KU26 742 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 RAET1GQ6H3X3 334 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 EMBQ6PCB8 327 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 Q6ZVL8 140 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 PRUNE1Q86TP1 453 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 TRIM74Q86UV6 250 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 ART4Q93070 314 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 RNF31Q96EP0 1072 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 PSKH2Q96QS6 385 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 GSDMCQ9BYG8 508 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 NOD2Q9HC29 1040 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 PHPT1Q9NRX4 125 aaPredicted RBP13.25□□□□□ -0.29
SPG7-207ENST00000563218 GRHL1Q9NZI5 618 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 MTRF1LQ9UGC7 380 aaKnown RBP13.25□□□□□ -0.29
SPG7-207ENST00000563218 SEPT3Q9UH03 358 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 PCDHB11Q9Y5F2 797 aa13.25□□□□□ -0.29
SPG7-207ENST00000563218 UTP20O75691 2785 aaKnown RBP13.25□□□□□ -0.29
SPG7-207ENST00000563218 USP9XQ93008 2570 aaPredicted RBP13.24□□□□□ -0.29
SPG7-207ENST00000563218 TRBV23OR9-2A0A075B6M9 112 aa13.24□□□□□ -0.29
SPG7-207ENST00000563218 IGHV1OR21-1A0A087WYE8 117 aa13.24□□□□□ -0.29
SPG7-207ENST00000563218 DUX1O43812 170 aa13.24□□□□□ -0.29
SPG7-207ENST00000563218 PPFIA2O75334 1257 aa13.24□□□□□ -0.29
SPG7-207ENST00000563218 SEC31AO94979 1220 aaKnown RBP13.24□□□□□ -0.29
SPG7-207ENST00000563218 THRAP10827 490 aa13.24□□□□□ -0.29
SPG7-207ENST00000563218 CD82P27701 267 aa13.24□□□□□ -0.29
SPG7-207ENST00000563218 RPL22P35268 128 aaKnown RBP13.24□□□□□ -0.29
SPG7-207ENST00000563218 UGT1A3P35503 534 aa13.24□□□□□ -0.29
SPG7-207ENST00000563218 TNNT3P45378 269 aaPredicted RBP13.24□□□□□ -0.29
SPG7-207ENST00000563218 PLTPP55058 493 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms