RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 CHID1Q9BWS9 393 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 GNEQ9Y223 722 aaKnown RBP11.16□□□□□ -0.62
RPAP1-204ENST00000562303 CDC42BPAQ5VT25 1732 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 BBIP1A8MTZ0 92 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 CHST10O43529 356 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 C9P02748 559 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 RPIAP49247 311 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 CYP4F8P98187 520 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 MC1RQ01726 317 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 ERICH5Q6P6B1 374 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 FAM131AQ6UXB0 335 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 ALYREFQ86V81 257 aaKnown RBP11.16□□□□□ -0.62
RPAP1-204ENST00000562303 STYXQ8WUJ0 223 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 KCTD15Q96SI1 283 aaPredicted RBP11.16□□□□□ -0.62
RPAP1-204ENST00000562303 MECRQ9BV79 373 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 LRMDAQ9H2I8 198 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 ARHGEF4Q9NR80 690 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 FRMPD1Q5SYB0 1578 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 UROSP10746 265 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 CD247P20963 164 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 IL12AP29459 219 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 PGDP52209 483 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 DSC2Q02487 901 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 PDK4Q16654 411 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 GALNT5Q7Z7M9 940 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 TRIM2Q9C040 744 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 PDP1Q9P0J1 537 aaPredicted RBP11.16□□□□□ -0.62
RPAP1-204ENST00000562303 SIRPGQ9P1W8 387 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 CPQQ9Y646 472 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 PLGP00747 810 aaPredicted RBP11.16□□□□□ -0.62
RPAP1-204ENST00000562303 CLCNKBP51801 687 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 POLR2JP52435 117 aaKnown RBP11.16□□□□□ -0.62
RPAP1-204ENST00000562303 ENPEPQ07075 957 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 SWI5Q1ZZU3 235 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 RNF43Q68DV7 783 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 CERS6Q6ZMG9 384 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 ATG14Q6ZNE5 492 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 CROCCP3Q8IVE0 287 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 RELTQ969Z4 430 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 ART5Q96L15 291 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 DHRS1Q96LJ7 313 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 CSPG4P5Q96PW8 444 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 LHX5Q9H2C1 402 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 GTF2IRD1Q9UHL9 959 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 BCL9O00512 1426 aa11.16□□□□□ -0.62
RPAP1-204ENST00000562303 UGT2B11O75310 529 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 BLKP51451 505 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 GNA12Q03113 381 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 HSPB3Q12988 150 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 GFOD2Q3B7J2 385 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 HSDL1Q3SXM5 330 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 CRYBG2Q8N1P7 616 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 HDDC3Q8N4P3 179 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 PRELID2Q8N945 189 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 IRGQQ8WZA9 623 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 KLK6Q92876 244 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 DNAJC19Q96DA6 116 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 IPPKQ9H8X2 491 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 NKIRAS2Q9NYR9 191 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 NUDT4Q9NZJ9 180 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 TRAFD1O14545 582 aaPredicted RBP11.15□□□□□ -0.62
RPAP1-204ENST00000562303 SYN3O14994 580 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 B3GALT2O43825 422 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 ANPEPP15144 967 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 PPP3R1P63098 170 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 SLC20A2Q08357 652 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 GPR107Q5VW38 600 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 SLC8B1Q6J4K2 584 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 TMEM220Q6QAJ8 160 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 GK5Q6ZS86 529 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 HOPXQ9BPY8 73 aaPredicted RBP11.15□□□□□ -0.62
RPAP1-204ENST00000562303 NOL11Q9H8H0 719 aaKnown RBP11.15□□□□□ -0.62
RPAP1-204ENST00000562303 RNF121Q9H920 327 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 RAB21Q9UL25 225 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 A0A075B6Q4 140 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 A0A1B0GVM2 712 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 TCAF2A6NFQ2 919 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 MFSD11O43934 449 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 NOS1APO75052 506 aaPredicted RBP11.15□□□□□ -0.62
RPAP1-204ENST00000562303 DUSP11O75319 330 aaKnown RBP11.15□□□□□ -0.62
RPAP1-204ENST00000562303 FADS2O95864 444 aaKnown RBP11.15□□□□□ -0.62
RPAP1-204ENST00000562303 CASRP41180 1078 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 ITGB3BPQ13352 177 aaPredicted RBP11.15□□□□□ -0.62
RPAP1-204ENST00000562303 C5orf22Q49AR2 442 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 NUP54Q7Z3B4 507 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 TSTD1Q8NFU3 115 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 RGS17Q9UGC6 210 aaPredicted RBP11.15□□□□□ -0.62
RPAP1-204ENST00000562303 CPSF4LA6NMK7 179 aaKnown RBP11.15□□□□□ -0.62
RPAP1-204ENST00000562303 ENPP3O14638 875 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 LGR5O75473 907 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 DHPSP49366 369 aaPredicted RBP11.15□□□□□ -0.62
RPAP1-204ENST00000562303 YBEYP58557 167 aaPredicted RBP11.15□□□□□ -0.62
RPAP1-204ENST00000562303 GMFBP60983 142 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 ELF3P78545 371 aaPredicted RBP11.15□□□□□ -0.62
RPAP1-204ENST00000562303 IL18R1Q13478 541 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 DCTN2Q13561 401 aaKnown RBP11.15□□□□□ -0.62
RPAP1-204ENST00000562303 SGCBQ16585 318 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 PLEKHG4Q58EX7 1191 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 LCLAT1Q6UWP7 414 aa11.15□□□□□ -0.62
RPAP1-204ENST00000562303 RANBP3LQ86VV4 465 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms