RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SLC30A1Q9Y6M5 507 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 PTPRBP23467 1997 aa13.25□□□□□ -0.29
CDH1-204ENST00000562118 WDFY3Q8IZQ1 3526 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 KLHL33A6NCF5 533 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 OR51F1A6NGY5 319 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 KMOO15229 486 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 TNFSF14O43557 240 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 NOBOXO60393 691 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 KCNJ13O60928 360 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 MTX2O75431 263 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 PRSS56P0CW18 603 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 ALPPL2P10696 532 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 ID4P47928 161 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 PRLHRP49683 370 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 ACADVLP49748 655 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 CTSCP53634 463 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 DBN1Q16643 649 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 TYSND1Q2T9J0 566 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 ANKRD20A4Q4UJ75 823 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 STEAP4Q687X5 459 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 DOK6Q6PKX4 331 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 CERS6Q6ZMG9 384 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 LRRTM4Q86VH4 590 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 SERPINA9Q86WD7 417 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 EID2Q8N6I1 236 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 NOA1Q8NC60 698 aaKnown RBP13.24□□□□□ -0.29
CDH1-204ENST00000562118 MNS1Q8NEH6 495 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 DEFB124Q8NES8 71 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 OR4L1Q8NH43 312 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 RHBDD1Q8TEB9 315 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 ART4Q93070 314 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 FCRL3Q96P31 734 aaPredicted RBP13.24□□□□□ -0.29
CDH1-204ENST00000562118 COPS8Q99627 209 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 NAT9Q9BTE0 207 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 RAB17Q9H0T7 212 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 SLC32A1Q9H598 525 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 ARFGAP3Q9NP61 516 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 NCKIPSDQ9NZQ3 722 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 PCDHGA1Q9Y5H4 931 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 ASXL3Q9C0F0 2248 aa13.24□□□□□ -0.29
CDH1-204ENST00000562118 GOLGA8MH3BSY2 632 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 CDK14O94921 469 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 GP1BAP07359 652 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 CTSEP14091 401 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 ADARP55265 1226 aaKnown RBP13.23□□□□□ -0.29
CDH1-204ENST00000562118 DHX9Q08211 1270 aaKnown RBP13.23□□□□□ -0.29
CDH1-204ENST00000562118 ILF3Q12906 894 aaKnown RBP eCLIP13.23□□□□□ -0.29
CDH1-204ENST00000562118 ILKQ13418 452 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 C1orf61Q13536 156 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 SEMA3AQ14563 771 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 NR1D2Q14995 579 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 TRIP6Q15654 476 aaKnown RBP13.23□□□□□ -0.29
CDH1-204ENST00000562118 DEFB133Q30KQ1 61 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 GLE1Q53GS7 698 aaKnown RBP13.23□□□□□ -0.29
CDH1-204ENST00000562118 LYPLAL1Q5VWZ2 237 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 ZDHHC24Q6UX98 284 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 WASH2PQ6VEQ5 465 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 ZNF438Q7Z4V0 828 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 CCNJLQ8IV13 435 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 IGDCC3Q8IVU1 814 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 SLC35F3Q8IY50 421 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 ARL10Q8N8L6 244 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 ZNF592Q92610 1267 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 APOLD1Q96LR9 279 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 EBNA1BP2Q99848 306 aaKnown RBP13.23□□□□□ -0.29
CDH1-204ENST00000562118 TRIM56Q9BRZ2 755 aaKnown RBP13.23□□□□□ -0.29
CDH1-204ENST00000562118 WASH6PQ9NQA3 447 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 SPATS2LQ9NUQ6 558 aaKnown RBP13.23□□□□□ -0.29
CDH1-204ENST00000562118 TAAR2Q9P1P5 351 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 MARCH4Q9P2E8 410 aaPredicted RBP13.23□□□□□ -0.29
CDH1-204ENST00000562118 FTSJ1Q9UET6 329 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 SLC23A2Q9UGH3 650 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 CRLS1Q9UJA2 301 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 WASF3Q9UPY6 502 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 SNX24Q9Y343 169 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 PLEKHM1Q9Y4G2 1056 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 FAM169AQ9Y6X4 670 aa13.23□□□□□ -0.29
CDH1-204ENST00000562118 RP1P56715 2156 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 C17orf113A0A1B0GUU1 675 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 EME2A4GXA9 379 aaPredicted RBP13.22□□□□□ -0.29
CDH1-204ENST00000562118 GIPC1O14908 333 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 EIF3HO15372 352 aaKnown RBP eCLIP13.22□□□□□ -0.29
CDH1-204ENST00000562118 AP2A2O94973 939 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 ASMTLO95671 621 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 TTC4O95801 387 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 ANXA6P08133 673 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 GSTM1P09488 218 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 ATP1B2P14415 290 aaPredicted RBP13.22□□□□□ -0.29
CDH1-204ENST00000562118 ZNF7P17097 686 aaPredicted RBP13.22□□□□□ -0.29
CDH1-204ENST00000562118 CKMT2P17540 419 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 PGAM1P18669 254 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 AK4P27144 223 aaPredicted RBP13.22□□□□□ -0.29
CDH1-204ENST00000562118 NSG1P42857 185 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 NOVA1P51513 510 aaKnown RBP13.22□□□□□ -0.29
CDH1-204ENST00000562118 MRPS25P82663 173 aaKnown RBP13.22□□□□□ -0.29
CDH1-204ENST00000562118 GSTM4Q03013 218 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 HLTFQ14527 1009 aaKnown RBP eCLIP13.22□□□□□ -0.29
CDH1-204ENST00000562118 CRYMQ14894 314 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 HIF1AQ16665 826 aa13.22□□□□□ -0.29
CDH1-204ENST00000562118 DNAJC21Q5F1R6 531 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms