RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 GATA5Q9BWX5 397 aaPredicted RBP7.21□□□□□ -1.26
CDH1-203ENST00000561751 TRIM54Q9BYV2 358 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 SDCBP2Q9H190 292 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 TMEM245Q9H330 911 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 NTN4Q9HB63 628 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 PLAC1Q9HBJ0 212 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 XPNPEP3Q9NQH7 507 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 EIF2B3Q9NR50 452 aaKnown RBP7.21□□□□□ -1.26
CDH1-203ENST00000561751 SNX15Q9NRS6 342 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 NSMCE4AQ9NXX6 385 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 MAT2BQ9NZL9 334 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 EHD3Q9NZN3 535 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 TMEM216Q9P0N5 145 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 OPTCQ9UBM4 332 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 SLC9A2Q9UBY0 812 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 PHF11Q9UIL8 331 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 GMEB2Q9UKD1 530 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 TRHDEQ9UKU6 1024 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 VAV3Q9UKW4 847 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 AGTPBP1Q9UPW5 1226 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 DAGLAQ9Y4D2 1042 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 LYVE1Q9Y5Y7 322 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 GJA3Q9Y6H8 435 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 RNF215Q9Y6U7 377 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 NRXN2Q9P2S2 1712 aa7.21□□□□□ -1.26
CDH1-203ENST00000561751 A0A0X1KG70 313 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 MEIOCA2RUB1 952 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 WTIPA6NIX2 430 aaPredicted RBP7.2□□□□□ -1.26
CDH1-203ENST00000561751 HNRNPCL2B2RXH8 293 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 PRSS44E7EML9 344 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 MRASO14807 208 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 TBX1O43435 398 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 PIGNO95427 931 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 HLA-DRAP01903 254 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 ALPLP05186 524 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 HOXD4P09016 255 aaPredicted RBP7.2□□□□□ -1.26
CDH1-203ENST00000561751 DBTP11182 482 aaKnown RBP7.2□□□□□ -1.26
CDH1-203ENST00000561751 ICAM2P13598 275 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 CPN2P22792 545 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 CHMP24386 653 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 HTR1EP28566 365 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 ARRB2P32121 409 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 KRT20P35900 424 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 GGT5P36269 586 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 GJC1P36383 396 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 SREBF1P36956 1147 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 SLC15A1P46059 708 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 HAAOP46952 286 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 CLK1P49759 484 aaKnown RBP7.2□□□□□ -1.26
CDH1-203ENST00000561751 CPT1AP50416 773 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 CSRP3P50461 194 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 ARSFP54793 590 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 SNAP25P60880 206 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 ISL1P61371 349 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 GTF2IP78347 998 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 EMX1Q04741 257 aaPredicted RBP7.2□□□□□ -1.26
CDH1-203ENST00000561751 GABPAQ06546 454 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 SNTA1Q13424 505 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 ASAH1Q13510 395 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 PEX6Q13608 980 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 GEN1Q17RS7 908 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 HSDL1Q3SXM5 330 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 PRR16Q569H4 304 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 GLRA4Q5JXX5 417 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 CLLU1Q5K131 121 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 SPANXN2Q5MJ10 180 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 LDLRAP1Q5SW96 308 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 TPRG1LQ5T0D9 272 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 DENND5AQ6IQ26 1287 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 LRRC8EQ6NSJ5 796 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 BRAT1Q6PJG6 821 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 CORO6Q6QEF8 472 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 ZNF704Q6ZNC4 412 aaPredicted RBP7.2□□□□□ -1.26
CDH1-203ENST00000561751 RAB44Q7Z6P3 723 aaPredicted RBP7.2□□□□□ -1.26
CDH1-203ENST00000561751 STRA8Q7Z7C7 330 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 LUZP2Q86TE4 346 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 CCDC190Q86UF4 302 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 FAM83AQ86UY5 434 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 FAM124AQ86V42 546 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 AMIGO1Q86WK6 493 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 BRSK2Q8IWQ3 736 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 PARP16Q8N5Y8 322 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 FAM71DQ8N9W8 422 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 TMEM35BQ8NCS4 154 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 APPL2Q8NEU8 664 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 DEDD2Q8WXF8 326 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 KAT5Q92993 513 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 PTP4A1Q93096 173 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 CCDC126Q96EE4 140 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 ZSWIM3Q96MP5 696 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 PCDHAC1Q9H158 963 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 SLC6A17Q9H1V8 727 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 CRISPLD1Q9H336 500 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 PCIF1Q9H4Z3 704 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 MEAF6Q9HAF1 191 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 TLR9Q9NR96 1032 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 C1orf112Q9NSG2 853 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 POLR3BQ9NW08 1133 aaPredicted RBP7.2□□□□□ -1.26
CDH1-203ENST00000561751 FAM118AQ9NWS6 357 aa7.2□□□□□ -1.26
CDH1-203ENST00000561751 ING3Q9NXR8 418 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms