RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CCL5P13501 91 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 RARGP13631 454 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 ITGAXP20702 1163 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 EDN2P20800 178 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 SAT1P21673 171 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 MCM3P25205 808 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 PSMC4P43686 418 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 RAD23BP54727 409 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 ZP1P60852 638 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 SORDQ00796 357 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 SRSF1Q07955 248 aaKnown RBP eCLIP3.79□□□□□ -1.8
HERC1-215ENST00000561436 WDR43Q15061 677 aaKnown RBP eCLIP3.79□□□□□ -1.8
HERC1-215ENST00000561436 NAB2Q15742 525 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 COL28A1Q2UY09 1125 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 PRTGQ2VWP7 1150 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 ODF3L2Q3SX64 289 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 DUSP28Q4G0W2 176 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 CAVIN4Q5BKX8 364 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 WASHC2DQ5SRD0 308 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 DCAF12L2Q5VW00 463 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 AWAT2Q6E213 333 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 GLDNQ6ZMI3 551 aaPredicted RBP3.79□□□□□ -1.8
HERC1-215ENST00000561436 CHST9Q7L1S5 443 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 SZRD1Q7Z422 152 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 GPSM1Q86YR5 675 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 TMTC2Q8N394 836 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 NME8Q8N427 588 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 CERS5Q8N5B7 392 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 Q8N9P0 234 aaPredicted RBP3.79□□□□□ -1.8
HERC1-215ENST00000561436 HUS1BQ8NHY5 278 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 SNAPC3Q92966 411 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 TEKT1Q969V4 418 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 PABPC5Q96DU9 382 aaKnown RBP3.79□□□□□ -1.8
HERC1-215ENST00000561436 PERPQ96FX8 193 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 POLR1BQ9H9Y6 1135 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 RANGRFQ9HD47 186 aaPredicted RBP3.79□□□□□ -1.8
HERC1-215ENST00000561436 CISD1Q9NZ45 108 aaKnown RBP3.79□□□□□ -1.8
HERC1-215ENST00000561436 IL36RNQ9UBH0 155 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 ADAM18Q9Y3Q7 739 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 PCNTO95613 3336 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 ARFGEF2Q9Y6D5 1785 aa3.79□□□□□ -1.8
HERC1-215ENST00000561436 IL16Q14005 1332 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 MROH5Q6ZUA9 1318 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 ANKRD31Q8N7Z5 1873 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 FAM237AA0A1B0GTK4 181 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 RPS10-NUDT3A0A1W2PQS6 291 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 A8MZ25 164 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 PDHXO00330 501 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 SOCS2O14508 198 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 HS6ST1O60243 411 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 EIF5BO60841 1220 aaKnown RBP3.78□□□□□ -1.8
HERC1-215ENST00000561436 ATG13O75143 517 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 GPC4O75487 556 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 SRPRAP08240 638 aaKnown RBP3.78□□□□□ -1.8
HERC1-215ENST00000561436 ARSBP15848 533 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 IL7RP16871 459 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 DDX5P17844 614 aaKnown RBP3.78□□□□□ -1.8
HERC1-215ENST00000561436 AGAP20933 346 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 MAPK4P31152 587 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 SHMT1P34896 483 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 HADHAP40939 763 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 LMAN1P49257 510 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 MRPL12P52815 198 aaKnown RBP3.78□□□□□ -1.8
HERC1-215ENST00000561436 LINC00205P59089 165 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 SELENOVP59797 346 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 CEBPZQ03701 1054 aaKnown RBP3.78□□□□□ -1.8
HERC1-215ENST00000561436 ACSM2AQ08AH3 577 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 GRIK3Q13003 919 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 NAE1Q13564 534 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 DUSP6Q16828 381 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 SOWAHAQ2M3V2 549 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 ALG11Q2TAA5 492 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 CCDC57Q2TAC2 916 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 DNTTIP2Q5QJE6 756 aaKnown RBP3.78□□□□□ -1.8
HERC1-215ENST00000561436 GKAP1Q5VSY0 366 aaPredicted RBP3.78□□□□□ -1.8
HERC1-215ENST00000561436 ACSM2BQ68CK6 577 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 TDHQ8IZJ6 230 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 ZBTB2Q8N680 514 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 PI4KAP1Q8N8J0 262 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 C7orf57Q8NEG2 295 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 FAM151AQ8WW52 585 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 SLC25A28Q96A46 364 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 MSI2Q96DH6 328 aaKnown RBP3.78□□□□□ -1.8
HERC1-215ENST00000561436 NAF1Q96HR8 494 aaKnown RBP3.78□□□□□ -1.8
HERC1-215ENST00000561436 NEUROD6Q96NK8 337 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 WDFY2Q96P53 400 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 FAM110AQ9BQ89 295 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 C1QTNF1Q9BXJ1 281 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 TEX12Q9BXU0 123 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 POLDIP3Q9BY77 421 aaKnown RBP3.78□□□□□ -1.8
HERC1-215ENST00000561436 KRTAP9-8Q9BYQ0 159 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 SIRT3Q9NTG7 399 aaPredicted RBP3.78□□□□□ -1.8
HERC1-215ENST00000561436 TMEM51Q9NW97 253 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 MTMR10Q9NXD2 777 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 ABI3Q9P2A4 366 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 CHORDC1Q9UHD1 332 aaPredicted RBP3.78□□□□□ -1.8
HERC1-215ENST00000561436 POLG2Q9UHN1 485 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 CUL9Q8IWT3 2517 aa3.78□□□□□ -1.8
HERC1-215ENST00000561436 LY6G6EA0A0G2JKS1 128 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 CLRN2A0PK11 232 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms