RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 DYRK3O43781 588 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 NRP2O60462 931 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 SLC2A3P11169 496 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 SLC7A2P52569 658 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 TBX4P57082 545 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 IFITM3Q01628 133 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 CHRNEQ04844 493 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 SELPLGQ14242 412 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 GRM3Q14832 879 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 POU6F1Q14863 301 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 ANO4Q32M45 955 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 PGS1Q32NB8 556 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 KIAA2013Q8IYS2 634 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 LSMEM2Q8N112 164 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 TTC9BQ8N6N2 239 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 TRPV3Q8NET8 790 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 RHOJQ9H4E5 214 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 PRDM5Q9NQX1 630 aaPredicted RBP13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 ENTPD7Q9NQZ7 604 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 IL37Q9NZH6 218 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 ACTR3BQ9P1U1 418 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 CEP350Q5VT06 3117 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 TTC24A2A3L6 582 aaPredicted RBP13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 UBDO15205 165 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 SCO2O43819 266 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 SYNCRIPO60506 623 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 PMPCBO75439 489 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 PEX11BO96011 259 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 ALBP02768 609 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 MAPK10P53779 464 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 PHC1P78364 1004 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 MRPL58Q14197 206 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 DGUOKQ16854 277 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 CTXN3Q4LDR2 81 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 AGKQ53H12 422 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 LDLRAP1Q5SW96 308 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 SLC16A12Q6ZSM3 486 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 USP43Q70EL4 1123 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 SLCO6A1Q86UG4 719 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 CNTN4Q8IWV2 1026 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 CMTR2Q8IYT2 770 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 ADGRG5Q8IZF4 528 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 UMODL1-AS1Q8N2C9 162 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 PPHLN1Q8NEY8 458 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 ANKK1Q8NFD2 765 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 STYXQ8WUJ0 223 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 RASSF5Q8WWW0 418 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 HDAC2Q92769 488 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 MUL1Q969V5 352 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 TSEN34Q9BSV6 310 aaKnown RBP13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 FUNDC2Q9BWH2 189 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 TP63Q9H3D4 680 aaPredicted RBP13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 TASP1Q9H6P5 420 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 HPS4Q9NQG7 708 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 TMEM161AQ9NX61 479 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 SLC39A10Q9ULF5 831 aa13.85□□□□□ -0.19
RABGGTA-220ENST00000560998 A0A1W2PQ45 241 aaPredicted RBP13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 A0A1W2PQY0 241 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 AOC2O75106 756 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 GUCY1B2O75343 617 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 JUNP05412 331 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 GSNP06396 782 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 ENO2P09104 434 aaPredicted RBP13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 UMPSP11172 480 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 COL6A1P12109 1028 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 BMP1P13497 986 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 RHOQP17081 205 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 CD40LGP29965 261 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 RFC2P35250 354 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 BMPR1AP36894 532 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 ETFBP38117 255 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 NAGLUP54802 743 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 TOP3AQ13472 1001 aaPredicted RBP13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 AQP6Q13520 282 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 DNASE1L3Q13609 305 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 LRIT3Q3SXY7 679 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 RANBP10Q6VN20 620 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 PIWIL4Q7Z3Z4 852 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 DSG4Q86SJ6 1040 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 SLC22A16Q86VW1 577 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 TBC1D21Q8IYX1 336 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 ATAD1Q8NBU5 361 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 PAPD5Q8NDF8 572 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 HMGCLL1Q8TB92 370 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 PHF10Q8WUB8 498 aaKnown RBP13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 OSCP1Q8WVF1 389 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 HDAC10Q969S8 669 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 MRGPRX2Q96LB1 330 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 C17orf80Q9BSJ5 609 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 MARCH7Q9H992 704 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 MEAF6Q9HAF1 191 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 NECTIN3Q9NQS3 549 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 ZNF229Q9UJW7 825 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 TLK1Q9UKI8 766 aa13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 MN1Q10571 1320 aaPredicted RBP13.84□□□□□ -0.19
RABGGTA-220ENST00000560998 FAM92AA1XBS5 289 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 OR6C75A6NL08 312 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 CLIC3O95833 236 aa13.83□□□□□ -0.19
RABGGTA-220ENST00000560998 KRT6AP02538 564 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms