RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 IVDP26440 423 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 MGAT1P26572 445 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 FOXN2P32314 431 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 ACTR1BP42025 376 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 MAGEA3P43357 314 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 CTSCP53634 463 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 ACTR1AP61163 376 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 CRADDP78560 199 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 B4GALNT1Q00973 533 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 LAMB3Q13751 1172 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 NR0B2Q15466 257 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 SKIDA1Q1XH10 827 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 GPR33Q49SQ1 333 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 PCID2Q5JVF3 399 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 RNASEH2BQ5TBB1 312 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 HES3Q5TGS1 186 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 SLC30A9Q6PML9 568 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 CRTC3Q6UUV7 619 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 CHST15Q7LFX5 561 aaPredicted RBP15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 LRRTM4Q86VH4 590 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 C17orf82Q86X59 251 aaPredicted RBP15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 JAMLQ86YT9 394 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 NXPE1Q8N323 547 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 MCUQ8NE86 351 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 FAM46DQ8NEK8 389 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 PPHLN1Q8NEY8 458 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 GDAP1Q8TB36 358 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 SCG3Q8WXD2 468 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 ULK4Q96C45 1275 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 SERPINB12Q96P63 405 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 ZCCHC2Q9C0B9 1178 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 TREX1Q9NSU2 369 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 SIRPGQ9P1W8 387 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 ZNHIT2Q9UHR6 403 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 CRLS1Q9UJA2 301 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 SLC30A1Q9Y6M5 507 aa15.29■□□□□ 0.04
RABGGTA-219ENST00000560871 CCDC162PA2VCL2 907 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 A6NCN8 305 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 OR51F1A6NGY5 319 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 B4DGG1 531 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 SGTAO43765 313 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 GP1BAP07359 652 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 MLNP12872 115 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 ACP5P13686 325 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 ACRV1P26436 265 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 NPY2RP49146 381 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 CDKN1CP49918 316 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 DUSP3P51452 185 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 CLCNKAP51800 687 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 E2F1Q01094 437 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 DR1Q01658 176 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 GTF2H3Q13889 308 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 HLTFQ14527 1009 aaKnown RBP eCLIP15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 SYDE1Q6ZW31 735 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 NLRP9Q7RTR0 991 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 ZNF572Q7Z3I7 529 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 PIANPQ8IYJ0 282 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 NAGSQ8N159 534 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 RASGEF1AQ8N9B8 481 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 SPATA4Q8NEY3 305 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 IFI44Q8TCB0 444 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 GLMNQ92990 594 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 TRIM44Q96DX7 344 aaPredicted RBP15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 TIMM29Q9BSF4 260 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 FAM96AQ9H5X1 160 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 MRM3Q9HC36 420 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 CHRAC1Q9NRG0 131 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 EVA1BQ9NVM1 165 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 BFARQ9NZS9 450 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 ASIC3Q9UHC3 531 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 KCNK6Q9Y257 313 aa15.28■□□□□ 0.04
RABGGTA-219ENST00000560871 IGF2RP11717 2491 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 COL27A1Q8IZC6 1860 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 KMOO15229 486 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 TTI1O43156 1089 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 AVILO75366 819 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 EML2O95834 649 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 AKT1P31749 480 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 RPIAP49247 311 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 SARNPP82979 210 aaKnown RBP15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 INSM1Q01101 510 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 CACNG1Q06432 222 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 CYP4F3Q08477 520 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 TARDBPQ13148 414 aaKnown RBP eCLIP15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 DHX34Q14147 1143 aaKnown RBP15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 PLA2G4EQ3MJ16 856 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 C14orf28Q4W4Y0 310 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 ZRANB3Q5FWF4 1079 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 PERM1Q5SV97 790 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 ARMC3Q5W041 872 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 AFTPHQ6ULP2 937 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 EFL1Q7Z2Z2 1120 aaKnown RBP15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 HOOK3Q86VS8 718 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 SERPINA9Q86WD7 417 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 TRAPPC5Q8IUR0 188 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 PPIL6Q8IXY8 311 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 AGGF1Q8N302 714 aaeCLIP15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 MPP5Q8N3R9 675 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 ZDHHC1Q8WTX9 485 aa15.27■□□□□ 0.04
RABGGTA-219ENST00000560871 PATE1Q8WXA2 126 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms